Gene Sked_07320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07320 
Symbol 
ID8632369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp834754 
End bp835761 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content77% 
IMG OID 
Productenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase 
Protein accessionYP_003313522 
Protein GI269794067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.840845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0428996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGCACG TCTACTCGAC CCCCCTGACC ACCCGGTTCC GCGGCCTCGA CGCGCGCGAC 
GGCGTCCTGC TCGAGGGCGA GGCCGGCTGG GGCGAGTTCT CCCCCTTCTG GGACTACGAC
GACGCGGAGG CCCTCGCCTG GTGGCGCGCC GCCCGCGAGG CCGCGGACGA GGGCTGGCCC
GCCGCGGTCC GCACCCGCGT CCCGGTCAAC GTCACCGTCC CGGCGACCGA CCCCGAGCGT
GCCCGCAGCA TCGTCCTCGC CTCCGGCGGC TGCCGGACCG CCAAGGTGAA GGTGGCCGAG
CGCGGCCAGA CCCTCTCCGA CGAGATCGCC CGGCTCGAGG CCGTCCGGGA CGCGCTCGGA
CCCGGCGGGT CGATCCGCGT CGACGCCAAC GGCGCCTGGG GCGTGGACGA GGCCGTCGAG
CGCCTCGTCC ACCTCGACCG CGCGGCCGGA GGGCTCGAGT ACGTCGAGCA GCCCTGCGCG
GACGTCGCGG GCCTCGCCGC CGTGCGGCGC CGCACCCACG TCCCGGTCGC CGCCGACGAG
TCCGTCCGCC GGGCCGAGGA CCCCTTCGAG GTGGTCCGCC AGGACGCCGC GGACATCATC
GTGCTCAAGG TGCAGCCGCT CGGCGGCGTG CGCGCCTGCC TCGAGCTCGC CGAGCAGGTC
GGGCTGCCCG TCGTCGTGTC CTCCGCCCTC GAGAGCTCGG TGGGGCTGGC GGCCGGGGTG
GCGCTCGCGG CCGCCCTGCC CCGCCTCGAC CACGCCTGCG GCCTCGCGAC CTCTCAGCTG
CTGGCCCACG ACGTGGTGCC CGAGCCGCTC CTGCCGGTCG ACGGCGACAT CCTCGTGGGA
CGCCCGGTCC CGACCGCGGC CACGCTCGCG GCGACCGACG CGCGCCGTCT CTCGCCCGAC
GTCGCAGCCC GCTGGCTCGA GCGGGTGTCG CGCGTGGAGG CTCTCGCCGC GGGGATCCGG
TCCTCCCGCG GTACGTCCAC GACGCGACGC GACGGAGCGG GCGCGTGA
 
Protein sequence
MVHVYSTPLT TRFRGLDARD GVLLEGEAGW GEFSPFWDYD DAEALAWWRA AREAADEGWP 
AAVRTRVPVN VTVPATDPER ARSIVLASGG CRTAKVKVAE RGQTLSDEIA RLEAVRDALG
PGGSIRVDAN GAWGVDEAVE RLVHLDRAAG GLEYVEQPCA DVAGLAAVRR RTHVPVAADE
SVRRAEDPFE VVRQDAADII VLKVQPLGGV RACLELAEQV GLPVVVSSAL ESSVGLAAGV
ALAAALPRLD HACGLATSQL LAHDVVPEPL LPVDGDILVG RPVPTAATLA ATDARRLSPD
VAARWLERVS RVEALAAGIR SSRGTSTTRR DGAGA