Gene Sked_07300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07300 
Symbol 
ID8632367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp832958 
End bp833923 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID 
Product1,4-Dihydroxy-2-naphthoate synthase 
Protein accessionYP_003313520 
Protein GI269794065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.202295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0739887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCAC TCCCCGCACC GGTGTCCCAG ACCTTCGACC CCGCCCGGTG GCGGCTCGTC 
ACCGGCTTCG AGGAGCTCAC CGACATCACC TACCACCGGG GCGTCGACCG GACCGGTGAG
CAGGAGCGCG ACCTGCCCGT GGTGCGCATC GCCTTCGACC GACCCGAGGT GCGCAACGCC
TTCCGACCGC ACACCGTCGA CGAGCTGCAC CGGGTGATGG ACCACGCCCG CATGACCTCG
GACGTCGCCG CCGTGATCCT CACCGGCAAC GGGCCGAGCC CCAAGGACGG CGGGTGGGCG
TTCTGCTCGG GCGGCGACCA GCGCATCCGG GGCCGCGACG GATACCGCTA CACGACGGCC
GACGACTCCG GGGCCGCGGC GCAGACCGCG GACCACATCG ACCCGGCGCA GGCCGGGCGC
CTGCACATCC TCGAGGTGCA GCGGCTCATG CGGACCATGC CCAAGGTGGT CATCGCTGTC
GTCAACGGGT GGGCTGCCGG CGGCGGCCAC TCCCTGCACG TGGTGGCGGA CCTGTCGATC
GCGAGCCGCG AGCACGCACG GTTCAAGCAG ACCGACGCGA ACGTCGGGTC TTTCGACGCG
GGCTACGGCT CGGCGCTCTT CGCGCGGCAG GTGGGGCAGA AGCGGGCGCG CGAGGTGTTC
TTCCTGGCGC GGGAGTACTC GGCGCAGGAC GCGTACGAGT GGGGCGCCGT CAACGAGGTG
GCCGACCACG ACGACGTGGA GGACCTGGCG CTCGAGTACG CGCGCACCAT CGCGACGAAG
TCGCCGCAGG CGATCAGGAT GCTCAAGTTC GCCTTCAACC TGGCGGACGA CGGTCTCGCG
GGGCAGCAGG TCTTCGCGGG CGAGGCGACG CGCCTGGCCT ACATGACGGA CGAGGCGGTC
GAGGGGCGTG ACGCGTTCCT CGAGCGGCGC GACCCGGACT GGTCGGCGTA CCCGTACTAC
TTCTGA
 
Protein sequence
MSSLPAPVSQ TFDPARWRLV TGFEELTDIT YHRGVDRTGE QERDLPVVRI AFDRPEVRNA 
FRPHTVDELH RVMDHARMTS DVAAVILTGN GPSPKDGGWA FCSGGDQRIR GRDGYRYTTA
DDSGAAAQTA DHIDPAQAGR LHILEVQRLM RTMPKVVIAV VNGWAAGGGH SLHVVADLSI
ASREHARFKQ TDANVGSFDA GYGSALFARQ VGQKRAREVF FLAREYSAQD AYEWGAVNEV
ADHDDVEDLA LEYARTIATK SPQAIRMLKF AFNLADDGLA GQQVFAGEAT RLAYMTDEAV
EGRDAFLERR DPDWSAYPYY F