Gene Sked_07000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07000 
Symbol 
ID8632337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp804402 
End bp805598 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content75% 
IMG OID 
Productdeacetylase, histone deacetylase/acetoin utilization protein 
Protein accessionYP_003313491 
Protein GI269794036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACA GCGTGCCTGC CCGTACCGAC GTGGCCTGGA GCCCCGAGCT CGCCCAGCAC 
GACTTCGGCC CGGGGCACCC GATGTCGCCC GTGCGGCTCG ACCTCACCGT GCGCCTCGCC
GGCGCCCTCG GCCTGCTCGA CGAGGCCCAC GTGCGTCTCG TCGACGCCGG CGTCGCCCCG
GACGCGCTCC TGACGACCGT GCACGAGCCG GCGTACGTCG CCGCGGTGCA CGCCGCCGCG
CACGGCGTCG AGGACGTGCA CCGAGGCCTG GGGACCGAGG ACGACCCGAT CTTCGCCGGG
ATGGACGACT CCGCCGCACG GATCGTCGCC GGGACCGTCG CGGTCGCGTC GTCCGTCTGG
CGGGGCGAGG CCCTGCACGG CGTGAGCATC GCGGGGGGCA TGCACCACGC GATGCCCGGT
GGGGCGGCCG GCTTCTGCGT GTACAACGAC GCGGCCGTCG CGATCCGCGC GCTGCTCGAC
GCGGGCGCTG AGCGCGTCGC GTACGTCGAC CTCGACGCGC ACCACGGCGA CGGCGTCGAG
CTCGTCTTCT GGGACGACCC GCGGGTGCTC ACCGTCTCGG TCCACCAGAG CGGCGCGACG
CTGTTCCCCG GCACCGGGCA CGCGACGGAC ACGGGCGGGG CAGCCGCCCC CGGAGGTGCG
GTCAACGTCG CGCTGCCTCC CCGGACCGGC AGCGCGGAGT GGCTGCGTGC CGTCGACGCG
GTGGTGCCCG AGGCGCTGCG GGCGTTCCGG CCCGACGTGA TCGTGTCCCA GCACGGCTGC
GACGCGCACG GTCGCGACAC CCTGAGCGAC CTCGACGTCG GCGTCGACGC GCAGCGTCAG
GCGACCGGGT GGGTCCACGA GCTGTCGCAC GAGCTGAGCG ACGGTCGCTG GGTGGCGCTC
GGGGGAGGGG GCTACGCGAT CGTCGAGGTG GTGCCGGTCG CCTGGTGCCA CGTCCTGGCG
ATCGCCCAGC ACCGCCCGGT CGACCCGGCC GCATCGGTCC CTGCCGTCTG GCGGACGCAC
GTCGAGACGG TGCTCGGGCA CCGCGCCCCC GAGGTGATGT GCGACGCCGA GGGGCCGGTG
ACCTTCCGCC CGTGGGGCGA GGGCTACGAC CCCGAGCAGG GGGTGGACCG GGCGATCCGT
GCCACCCGGC AGGCGACGTT CCCGCTGCTG GGGGTGGACG TCAGCCTGGA CGTCTGA
 
Protein sequence
MPNSVPARTD VAWSPELAQH DFGPGHPMSP VRLDLTVRLA GALGLLDEAH VRLVDAGVAP 
DALLTTVHEP AYVAAVHAAA HGVEDVHRGL GTEDDPIFAG MDDSAARIVA GTVAVASSVW
RGEALHGVSI AGGMHHAMPG GAAGFCVYND AAVAIRALLD AGAERVAYVD LDAHHGDGVE
LVFWDDPRVL TVSVHQSGAT LFPGTGHATD TGGAAAPGGA VNVALPPRTG SAEWLRAVDA
VVPEALRAFR PDVIVSQHGC DAHGRDTLSD LDVGVDAQRQ ATGWVHELSH ELSDGRWVAL
GGGGYAIVEV VPVAWCHVLA IAQHRPVDPA ASVPAVWRTH VETVLGHRAP EVMCDAEGPV
TFRPWGEGYD PEQGVDRAIR ATRQATFPLL GVDVSLDV