| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06950 |
|---|
| Symbol | |
|---|
| ID | 8632332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 799247 |
|---|
| End bp | 799951 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ribulose-5-phosphate 4-epimerase-like epimerase or aldolase |
|---|
| Protein accession | YP_003313486 |
|---|
| Protein GI | 269794031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CTCCGCAGGC GCCCGGTCTG GCCTCCTATC CCGACGAGGT CCGCGAGGAG
GTCGCGCGAG TCCGTGAGGT CGTCGCCCGC CTGCACGCCG AGCTCCCGCG CTGGGAGCTG
GTCGTGTGGA CCGCCGGGAA CGTCTCGCAG CGCCTGACGA CGGCCGACCT CTTCGTCATC
AAGCCGTCGG GGGTCACCTA CGACGAGCTG ACACCGGAGT CGATGGTCGT GTGCACCCTG
GACGGCGAGC TCGTCGACGG GACGCGGTCA CCGTCGTCCG ACACGGCAGC CCACGCCTAC
GTCTACCGGC ACATGCCCCA CGTCGGGGGA GTGGTGCACA CCCACTCCAC CTACGCGACC
GCCTGGGCGG CGCGCGGCGA GCCCGTCCCG TGCGTCCTGA CGATGATGGC CGACGAGTTC
GGCGGCGACG TCCCGGTCGG GCCGTTCGCG CTCATCGGTG ACGACTCGAT CGGTCAGGGC
ATCGTCGAGA CGCTCTCCGA GAGCCGGTCG CCGGCGGTGC TCATGCGCAA CCACGGACCG
TTCACCATCG GCGCCGACGC GAAGGCCGCG GTCAAGGCTG CCGTCATGGT CGAGGAGGTC
GCCCGCACGG TGCACATCTC CCGCCAGCTC GGCGAGCCGA CGCGGATCCC GCAGGATCGG
GTCGACTCGC TCTACGACCG CTACCAGAAC GTCTACGGGC GGTAG
|
|---|
| Protein sequence | MSAAPQAPGL ASYPDEVREE VARVREVVAR LHAELPRWEL VVWTAGNVSQ RLTTADLFVI
KPSGVTYDEL TPESMVVCTL DGELVDGTRS PSSDTAAHAY VYRHMPHVGG VVHTHSTYAT
AWAARGEPVP CVLTMMADEF GGDVPVGPFA LIGDDSIGQG IVETLSESRS PAVLMRNHGP
FTIGADAKAA VKAAVMVEEV ARTVHISRQL GEPTRIPQDR VDSLYDRYQN VYGR
|
|---|
| |