Gene Sked_06780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06780 
Symbol 
ID8632315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp776150 
End bp777388 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313472 
Protein GI269794017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACAG CCCACACGAT CCCGTTCGGT GAGCCGGTCT CCTGGGATCC GACGACGTGG 
GGTGCCCTCG TGCAGGGGCG ATCCTCGATC CTGTTCGCCG TCCTCGCAGG GGTGTCGGTC
GCGCTCATGA CAGGCGGCAC GGCGGGGGTG TTCGGAGACA GGCTGCGGGA GGCGCGGACC
CGCCTGCTGG TGCGGGCTGT GCTGATCTTC GCGCTCGGCA CGGCTCTGAC GATCATCAGC
AGTCAGATCG CGATCGTCCT GCAGGTCTAC GCGGTCCTGC TCGTGGCGGT CCTCCCGCTC
CTGCGCTGGT CGGTCCGCCG GCTCCTCGTG CTGGCCTGCA TCCTCGCGGT CGTCTCGCCT
GTCGTCAACG TCTACGGCGC GTACGGCATC GATGTCTGGG GAGGGCAGCA CGGCGAGGTC
GCCGCGCTCT TCGTCGGAGG GGTCTACCCG GCAGTGGTGT GGCTGACCTT CACCGTCGTC
GGGCTGCTCG TCGGCAGGCT CGACCTCTCG TCTGTCTGGG TCGCCGCCCG GCTGCTGCTC
GTCGGAGTCC TGCTGGCAGT GGTCGGGTAC GCGGCAGGAT GGGCCACCGA CGGGGGCGCC
GGCGGGCGCC GGTCGTTCAG GGCCGGCAGC AGCCCGAGTG GCGCGACCGG TAGCGGAGAG
AGCAAGGAGG TCGGGTTCCG GCTCGGCACC GAGCCCCCGG ACGCAGGTCC TCCGGGCACC
CCCGTCCAGG GTGAGGACGT CGACCTCTCG GGGCGCTCGT GCCTGAGGAC TCCCGACGAC
ACGATCAGGT GCGGCGCCCT CGGTGACGAG ACGCCGTTCG GGGAAGCAGA GTGGGAGCGT
CCTGGGCTCG AGGAGCTGCT CGGAGCGGCA CCGCACTCTG CGACGACCTT CGAGGTTCTC
GGCTCAGGCG GGTTCGCGCT CGCGGTCTTG GCGCTGTGCC TGCTCGCCCC TCGAGGCCTC
CGCGCCGTGC TCTACCCCGT GCGTGCGGTC GGGACCGTCC CGTTGACCCT CTACGTCGCA
CACGTGGTGT TCTTCGAGGT CGTGGGCGAC CGGTTGGGTG ACCACGACAG AGAGATGTTC
CTGGCCCAGG CCGTTGTCGC GCTCGCCTTC GCCAGCCTCT GGTCGAGGTG GCGGGGTCAG
GGGCCGGTCG AGCAGCTCAT CGCGACCGTC GCGCGTCGGA CGGCCGAGAC CGCTCCAGCG
GACCGCCCTG CTGCGCAACC AGGTCGACCA GTCGGCTGA
 
Protein sequence
MVTAHTIPFG EPVSWDPTTW GALVQGRSSI LFAVLAGVSV ALMTGGTAGV FGDRLREART 
RLLVRAVLIF ALGTALTIIS SQIAIVLQVY AVLLVAVLPL LRWSVRRLLV LACILAVVSP
VVNVYGAYGI DVWGGQHGEV AALFVGGVYP AVVWLTFTVV GLLVGRLDLS SVWVAARLLL
VGVLLAVVGY AAGWATDGGA GGRRSFRAGS SPSGATGSGE SKEVGFRLGT EPPDAGPPGT
PVQGEDVDLS GRSCLRTPDD TIRCGALGDE TPFGEAEWER PGLEELLGAA PHSATTFEVL
GSGGFALAVL ALCLLAPRGL RAVLYPVRAV GTVPLTLYVA HVVFFEVVGD RLGDHDREMF
LAQAVVALAF ASLWSRWRGQ GPVEQLIATV ARRTAETAPA DRPAAQPGRP VG