Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06570 |
Symbol | |
ID | 8632294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 750579 |
End bp | 751547 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003313451 |
Protein GI | 269793996 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCG CCAGCACCCC CGCCCCCGTC TCCGGCGTCG TCGACACGAC CGACAGCGCG ACGGTCGCCC CCAAGGCCAC GAAGAGCCGC GCCGGCCGTG GCCGACGCCG CCCGACGAGC CCCCGCGGCA AGTCCTCGAT CACCCTCACG GTGATCATGG TCGTGATGTT CATCTACGTG CTGCTCCCGC TCGTGTGGCT GATCATCAAC TCGACCAAGA CCAACGGCGG GCTCTTCACG TCCTTCGGTC TCTGGTTCGC CGACGACTTC GCCCTCTGGG ACAACATCAA GCAGCTGTTC ACCTACCAGA ACTCCGTGTA CCCGCGCTGG CTCGCCAACA CGGTGCTCTA CGCGGGTGTC GGCGGCATCG GCGCGACCAT CCTCGCGACC TTCGGCGGCT ACGGCCTGGC CAAGTACAAC TTCCCCGGTC GCCGCGCAGC CTTCGCGATC GTCATCGGCG CCATGACCGT GCCGATGACC GCCCTCGCGG TCCCCACGTT CCTCATGTTC AGCCAGCTCG GCCTGACGAA CACGGTGTGG GCGGTGCTCA TCCCCGCGCT CGCCAGCCCC TTCGGGCTGT ACCTCATGTA CGTGTTCGCC CAGGACTCGG TCCCCGACTC CATCCTCGAG GCAGCGCGTC TCGACGGCGC CGGTGAGCTC CGCACCTTCC TCACCGTCTC GCTGCGGCTG CTGGCCCCCG GCTTCGTCAC CGTCCTGCTG TTCGCGGTCG TGGCCACCTG GAACAACTAC TTCCTGCCCC TCATCATGCT GACGGACCCC AAGCTCTACC CGCTGACCGT CGGCCTCAAC CAGTGGAACT CGCAGTCCGG GTCCTCCGGC ACGAGCGAGC CCGTGTACAA CCTCGTGCTC GTCGGCTCGC TCGTCGCGAT CATCCCGCTG GTCATCGTCT TCCTCTCGCT GCAGCGCTTC TGGCAGTCCG GCCTCGCGGC CGGCGCCGTG AAGCAGTAG
|
Protein sequence | MTTASTPAPV SGVVDTTDSA TVAPKATKSR AGRGRRRPTS PRGKSSITLT VIMVVMFIYV LLPLVWLIIN STKTNGGLFT SFGLWFADDF ALWDNIKQLF TYQNSVYPRW LANTVLYAGV GGIGATILAT FGGYGLAKYN FPGRRAAFAI VIGAMTVPMT ALAVPTFLMF SQLGLTNTVW AVLIPALASP FGLYLMYVFA QDSVPDSILE AARLDGAGEL RTFLTVSLRL LAPGFVTVLL FAVVATWNNY FLPLIMLTDP KLYPLTVGLN QWNSQSGSSG TSEPVYNLVL VGSLVAIIPL VIVFLSLQRF WQSGLAAGAV KQ
|
| |