Gene Sked_06570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06570 
Symbol 
ID8632294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp750579 
End bp751547 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID 
Productcarbohydrate ABC transporter membrane protein 
Protein accessionYP_003313451 
Protein GI269793996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCAGCACCCC CGCCCCCGTC TCCGGCGTCG TCGACACGAC CGACAGCGCG 
ACGGTCGCCC CCAAGGCCAC GAAGAGCCGC GCCGGCCGTG GCCGACGCCG CCCGACGAGC
CCCCGCGGCA AGTCCTCGAT CACCCTCACG GTGATCATGG TCGTGATGTT CATCTACGTG
CTGCTCCCGC TCGTGTGGCT GATCATCAAC TCGACCAAGA CCAACGGCGG GCTCTTCACG
TCCTTCGGTC TCTGGTTCGC CGACGACTTC GCCCTCTGGG ACAACATCAA GCAGCTGTTC
ACCTACCAGA ACTCCGTGTA CCCGCGCTGG CTCGCCAACA CGGTGCTCTA CGCGGGTGTC
GGCGGCATCG GCGCGACCAT CCTCGCGACC TTCGGCGGCT ACGGCCTGGC CAAGTACAAC
TTCCCCGGTC GCCGCGCAGC CTTCGCGATC GTCATCGGCG CCATGACCGT GCCGATGACC
GCCCTCGCGG TCCCCACGTT CCTCATGTTC AGCCAGCTCG GCCTGACGAA CACGGTGTGG
GCGGTGCTCA TCCCCGCGCT CGCCAGCCCC TTCGGGCTGT ACCTCATGTA CGTGTTCGCC
CAGGACTCGG TCCCCGACTC CATCCTCGAG GCAGCGCGTC TCGACGGCGC CGGTGAGCTC
CGCACCTTCC TCACCGTCTC GCTGCGGCTG CTGGCCCCCG GCTTCGTCAC CGTCCTGCTG
TTCGCGGTCG TGGCCACCTG GAACAACTAC TTCCTGCCCC TCATCATGCT GACGGACCCC
AAGCTCTACC CGCTGACCGT CGGCCTCAAC CAGTGGAACT CGCAGTCCGG GTCCTCCGGC
ACGAGCGAGC CCGTGTACAA CCTCGTGCTC GTCGGCTCGC TCGTCGCGAT CATCCCGCTG
GTCATCGTCT TCCTCTCGCT GCAGCGCTTC TGGCAGTCCG GCCTCGCGGC CGGCGCCGTG
AAGCAGTAG
 
Protein sequence
MTTASTPAPV SGVVDTTDSA TVAPKATKSR AGRGRRRPTS PRGKSSITLT VIMVVMFIYV 
LLPLVWLIIN STKTNGGLFT SFGLWFADDF ALWDNIKQLF TYQNSVYPRW LANTVLYAGV
GGIGATILAT FGGYGLAKYN FPGRRAAFAI VIGAMTVPMT ALAVPTFLMF SQLGLTNTVW
AVLIPALASP FGLYLMYVFA QDSVPDSILE AARLDGAGEL RTFLTVSLRL LAPGFVTVLL
FAVVATWNNY FLPLIMLTDP KLYPLTVGLN QWNSQSGSSG TSEPVYNLVL VGSLVAIIPL
VIVFLSLQRF WQSGLAAGAV KQ