Gene Sked_06500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06500 
Symbol 
ID8632287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp740824 
End bp741675 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003313444 
Protein GI269793989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.169518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCTA CCGACACCCC GGACCCGGAG GACTCGACGT CATCGGCAGC CCCGTCGGGC 
GCTGCGCCGG CCGTCGCCCC CGTGCGCGGC ACCGGGCTGC GCCTCGCCTA CGACCAGCGG
GTGGTCGTCG ACGGTCTCGA CGTCGAGATC CCCGCGGGGT CGTTCACCGT GATCGTCGGC
CCGAACGGGT GCGGCAAGTC GACGCTGCTG CGCGCCCTCG GCCGGACGCT CACCCCGCGC
GCCGGGCACG TCGACCTCTA CGGGGAACCG CTCGCGTCGC TCGGCAACAA GCAGATCGCC
AGGATGCTGG CACTGCTCCC GCAGACACCG GTCGCCCCCG AGGCGATCAC GGTGCGCGAC
CTCGTGGGTC GCGGCCGCTA CGCCTACCAG ACGCTCCTGC GCCAGTGGTC GGCGTCCGAC
GGTGTCGCGG TGCGTGCCGC CATGGAGGCC ACCGGGACCA CCGACCTCGC CGACCGGAAG
GTGTCCGAGC TGTCGGGCGG GCAGCGCCAG CGCGTGTGGA TCGCGATGGT GCTCGCCCAG
GACACCGACC TGCTGCTGCT CGACGAGCCC ACCACCTTCC TCGACATCAC GCACCAGGTG
GACGTCCTCG ACCTGTGCGC GCAGATGCAC CGGGAGGGAC GGACCCTGGT CGCGGTCCTC
CACGACCTCA ACCTCGCTGC CCGGTACGCG ACGCACATGA TCGCGATGCG CGACGGCGAG
GTCGTCGCCA CCGGCACCCC GCACGAGGTG GTCACGGCGG AGGGTGTCGA GGAGATCTTC
GGCCTGCGCT GCCGCATCAT CACCGACCCC GAGAGCGAGA CGCCGCTCGT GGTCCCGCTC
GTCACCCGGT GA
 
Protein sequence
MTATDTPDPE DSTSSAAPSG AAPAVAPVRG TGLRLAYDQR VVVDGLDVEI PAGSFTVIVG 
PNGCGKSTLL RALGRTLTPR AGHVDLYGEP LASLGNKQIA RMLALLPQTP VAPEAITVRD
LVGRGRYAYQ TLLRQWSASD GVAVRAAMEA TGTTDLADRK VSELSGGQRQ RVWIAMVLAQ
DTDLLLLDEP TTFLDITHQV DVLDLCAQMH REGRTLVAVL HDLNLAARYA THMIAMRDGE
VVATGTPHEV VTAEGVEEIF GLRCRIITDP ESETPLVVPL VTR