| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06320 |
|---|
| Symbol | |
|---|
| ID | 8632269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 713196 |
|---|
| End bp | 714092 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate ABC transporter membrane protein |
|---|
| Protein accession | YP_003313426 |
|---|
| Protein GI | 269793971 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA CACTCGAGCG GCCGACAGGC GACGCCCGGA CCAGCCACGA GCGCGCCTAC
GACCGGTCGG CGGGCCGCCG CCGCGCCGGG ACCATCGCGG TATACGTAGG CCTGGCGGTC
CTCGCCGTGA TCTACGTCTA CCCGTTCCTG CTGTCGATCG CGAACTCCTT CAAGGACAAC
GCCGACGCGG CCGCGAACCC GATCAGCCTG ATCCCGCAGA CCTTCACGAC GGCGGCCTAC
GAGCGGCTGT TCGAGGCCGA CTTCCCGACG TGGTTCAAGA ACTCCGCGAT CGTCACCGTC
GTGGTGACCA CCGGGCGCGT GTTCTTCAGC GCCCTCGCCG GCTATGCGCT GTCGCGGCTG
CGGTTCCGCG GGCGTGCCCT CGTGTTCGCC GGCCTCGTCG CGGTGATGTC CGTGCCCTCC
GTGGTGCTGC TCATCCCGCG GTTCCTCGTG ATCAACCAGC TGGGCATCTA CGACAGCTAC
GCGGGCATGA TCATCCCGCT GCTCGCCGAC GCCGCCGGGA TCTTCATCAT GAAGAACTTC
TTCGAGTCGA TCCCCACCTC CGTCGAGGAG GCGGCACGCA TCGACGGAGC CGGGGTGTTC
CGACGGTTCT GGTCGGTGGT GCTGCCGATG GCCCGCCCGG CGGTCGTCAC CATCTTCATC
CTGTCGTTCC AGGGCTCGTG GAACGAGCTG TCGCACATGA TCGTCGCGAC GCAGTCCCCC
GAGCTCTTCA CGCTCACCAA GGGCGTGGCG CAGCTGGCGT CCGGCGCGCT GAGCGCCGGC
TCGCAGTTCC CCATCAAGCT GGCCGCCGCG ACGGTCATGA CCATCCCGGT GGCGGTCCTG
TTCTTCGTGT TCCAGCGCAA GATCATGAAC TCGTCGGCGG GCGCGGTGAA GGAGTGA
|
|---|
| Protein sequence | MTTTLERPTG DARTSHERAY DRSAGRRRAG TIAVYVGLAV LAVIYVYPFL LSIANSFKDN
ADAAANPISL IPQTFTTAAY ERLFEADFPT WFKNSAIVTV VVTTGRVFFS ALAGYALSRL
RFRGRALVFA GLVAVMSVPS VVLLIPRFLV INQLGIYDSY AGMIIPLLAD AAGIFIMKNF
FESIPTSVEE AARIDGAGVF RRFWSVVLPM ARPAVVTIFI LSFQGSWNEL SHMIVATQSP
ELFTLTKGVA QLASGALSAG SQFPIKLAAA TVMTIPVAVL FFVFQRKIMN SSAGAVKE
|
|---|
| |