Gene Sked_06100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06100 
Symbol 
ID8632247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp691361 
End bp692047 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID 
Productribulose-5-phosphate 4-epimerase-like epimerase or aldolase 
Protein accessionYP_003313404 
Protein GI269793949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.214658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TGGCACCAGC GAACCCCCGG ACGGACAGCC GCGCGAGCCG CGCGGTGCGG 
GAGGAGATCC TCTACTGCTG CCGCGAGTCG GTCCGCGTCG GCCTGAACTT CAACACCCAG
GGCAACATCA GCGTGCGGCT CCCGGGCACG CACGACGGCG CCGACGCCAT CGTCATCACG
CCCTCCGACG TCCGGTACGA CGCGATGAGC GTCGACGACA TGGTGGTCGT GGGGCTCGAC
GGCACCGTCC TCGAGGGAGA CCTGCTCCCG TCGACGGAGC TCCCGGTGCA CCTCGAGCAC
TACCTGCGCC GCCCCGACGT GCAGGCGATC GTCCACACGG AGTCCACCTT CGTCAACGTC
CTCGGTGCGC TCGGCCGGAG GATCGACCCC GTGCTGCTCA ACATGGTGCT CTACGCCAAG
GGGCCGGTCG AGACCATGCC CTTCGAGTTC TCGACCAACG CCGACTTCGG GCGCCGCAGC
GCCGAGCTCA TGGGCGACGC GGTGAACGCC GTCGTGTGGG GCAACCACGG GCTGCTGGCG
GTCGGGACCT CCCTCAAGCT CGCGTTCAAG GTGGCCGTGG CCGTCGAGGA GAACGCCGAG
GTCCTGCTCC GGGCGAGCGC TGCGGGGACG CCGAACGTGC TCGTCTACGA CGACATCGAC
GTGCCGGAGG GGGCTCGCCT GCCCTGA
 
Protein sequence
MTTVAPANPR TDSRASRAVR EEILYCCRES VRVGLNFNTQ GNISVRLPGT HDGADAIVIT 
PSDVRYDAMS VDDMVVVGLD GTVLEGDLLP STELPVHLEH YLRRPDVQAI VHTESTFVNV
LGALGRRIDP VLLNMVLYAK GPVETMPFEF STNADFGRRS AELMGDAVNA VVWGNHGLLA
VGTSLKLAFK VAVAVEENAE VLLRASAAGT PNVLVYDDID VPEGARLP