Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06100 |
Symbol | |
ID | 8632247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 691361 |
End bp | 692047 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ribulose-5-phosphate 4-epimerase-like epimerase or aldolase |
Protein accession | YP_003313404 |
Protein GI | 269793949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.214658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG TGGCACCAGC GAACCCCCGG ACGGACAGCC GCGCGAGCCG CGCGGTGCGG GAGGAGATCC TCTACTGCTG CCGCGAGTCG GTCCGCGTCG GCCTGAACTT CAACACCCAG GGCAACATCA GCGTGCGGCT CCCGGGCACG CACGACGGCG CCGACGCCAT CGTCATCACG CCCTCCGACG TCCGGTACGA CGCGATGAGC GTCGACGACA TGGTGGTCGT GGGGCTCGAC GGCACCGTCC TCGAGGGAGA CCTGCTCCCG TCGACGGAGC TCCCGGTGCA CCTCGAGCAC TACCTGCGCC GCCCCGACGT GCAGGCGATC GTCCACACGG AGTCCACCTT CGTCAACGTC CTCGGTGCGC TCGGCCGGAG GATCGACCCC GTGCTGCTCA ACATGGTGCT CTACGCCAAG GGGCCGGTCG AGACCATGCC CTTCGAGTTC TCGACCAACG CCGACTTCGG GCGCCGCAGC GCCGAGCTCA TGGGCGACGC GGTGAACGCC GTCGTGTGGG GCAACCACGG GCTGCTGGCG GTCGGGACCT CCCTCAAGCT CGCGTTCAAG GTGGCCGTGG CCGTCGAGGA GAACGCCGAG GTCCTGCTCC GGGCGAGCGC TGCGGGGACG CCGAACGTGC TCGTCTACGA CGACATCGAC GTGCCGGAGG GGGCTCGCCT GCCCTGA
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Protein sequence | MTTVAPANPR TDSRASRAVR EEILYCCRES VRVGLNFNTQ GNISVRLPGT HDGADAIVIT PSDVRYDAMS VDDMVVVGLD GTVLEGDLLP STELPVHLEH YLRRPDVQAI VHTESTFVNV LGALGRRIDP VLLNMVLYAK GPVETMPFEF STNADFGRRS AELMGDAVNA VVWGNHGLLA VGTSLKLAFK VAVAVEENAE VLLRASAAGT PNVLVYDDID VPEGARLP
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