| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06030 |
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| Symbol | |
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| ID | 8632240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 681629 |
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| End bp | 683332 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | serine phosphatase RsbU, regulator of sigma subunit |
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| Protein accession | YP_003313397 |
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| Protein GI | 269793942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.486099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.150997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTCTG AGTGGTTCTC CCACACCGCC CACAGCAGCC AGTCCGGCCG TGAGGCGATG
GCCTTCCCCT GGCACGAGAC CCCGCTGGGG GACCCGTCCA CCTGGGACGA GACGCTGCGG
CAGTCCGTCC GGCTGTGCTT CAGCACGCAG TTCCCGGTGA TGATCGCCTG GGGCCCGGAG
ATGACCATGA TCTACAACGA CGGCTACGCG CAGATCCTCG GGCCGAACAA GCGCCAGCAC
GCGATGGGCA AGCCCATCCG CGAGGTCTGG ACCGAGATCT GGGACGACGT CGAGACCATG
TTCGGGATGG TCTTCTCGAC CGTCGCCCCC GTGGGCGGCG CGGAGCACAA GATCGTCATG
AACCGGTCGG GCTTCGACGA GGAGACCTAC TTCACCTTCT CGTGCAGCCC GCTCGTCGAC
TCCACCGGTC AGGTGGTCGG CGTCATGGAC ATCTCCGCGG AGATCACCGA CCAGGTGGTC
TCCGTGCGCA GGCTCTCCAC CCTCGACGAC CTGCACAGCC AGATGCAGAC CAGCAGGGGC
GACGGTGTCG ACCGCATGGG CCTCGCCCTG GAGGTCCTGG CCGAGAGCGT CGACCTGAGC
CGGAGCGCGA TCATGCTCGA GTCCGACGGG CAGCTGGTCG CGGTCCCCGG CAGCGACGTC
GGCCTCGACC TGACGGACCC GGAGGGCCTC TACGCCGCCG TGCTGCGCGA GGGACGCACG
CAGTTCGTCG GGCACGACGT CGCCGTGCCG CTGGTCGTCG ACGACCACGG CTCCATGGTC
GGGCTGCTCG TGGCCGAGGG GTCCCCGATG CGCCCGGTCG ACTCCTCTCT CGTCTCCTTC
GTCGAGCTCA TCGCCTCTGC GCTCTCGGGC GCGCTCCAGG CGGTCAGCGC GCAGCGAGCC
GTCCTCGACG CCCGTGACGC GCGCACCGCG CTCATCGAGG CGACCGAGCG CCAGTCACGA
GAGACCTCGA TCGCGCTGCA GCAGTCGATG CTCACGCCGC CCGTCCAGCC CTGCGGTCTC
GACCTCATGG CGTGGTACCA GCCGTCCCGC GAGGACCTGC AGATCGGTGG GGACTGGTAC
GACTCGTTCC TCACCAAGAA CGGGTGCACC ACCCTGGTGG TCGGTGACGT GACCGGGCAC
GACCACGTCG CCGCGGCAGC GATGGGTCAG CTCCGCGGCC TCGTCCGCGC GATCGCCTTC
GACAGCGAGC AGAGCCCGGC GCGGATCTTC GAGCGGGCGG ACACCGCCAT CGCGGGCCTC
GACCTGGGGA ACCACAGCAC CGCGACCGCG GTCGTGGCGC AGATCGAGGA GCCCGCGCCC
GGCTCGACCG GCACCTCGCG CACCCTGCGG TGGTCGAACG CGGCGCACCC CTACCCTGCG
GTCGTCCGTG CGGACGGCAG CGTCGAGCTG CTGCGCCGGA CCAACGACAT CCCGCTGGGC
ATCACCCAGG GCTTCGACCG CCGAGAGCAC GAGGAGCTCC TGCACGAGGG TGACACCCTC
GTGCTCTACA CCGACGGTCT CGTCGAACGT CGGGGCGAGA TCCTCTCGAC GGGCCTCGCG
CAGCTCACCG ATGCCCTGGC AGACGGGCAC GCACGCACGA TCGTCGACCT CGCCGAGCAC
GTCCTGTCGT CTCTCGCGCC GACCCCCACG GACGACGTCG CGCTCGTCCT GGTGCGCGTG
CTGCCCGCAG GTGACGCCCG ATGA
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| Protein sequence | MISEWFSHTA HSSQSGREAM AFPWHETPLG DPSTWDETLR QSVRLCFSTQ FPVMIAWGPE
MTMIYNDGYA QILGPNKRQH AMGKPIREVW TEIWDDVETM FGMVFSTVAP VGGAEHKIVM
NRSGFDEETY FTFSCSPLVD STGQVVGVMD ISAEITDQVV SVRRLSTLDD LHSQMQTSRG
DGVDRMGLAL EVLAESVDLS RSAIMLESDG QLVAVPGSDV GLDLTDPEGL YAAVLREGRT
QFVGHDVAVP LVVDDHGSMV GLLVAEGSPM RPVDSSLVSF VELIASALSG ALQAVSAQRA
VLDARDARTA LIEATERQSR ETSIALQQSM LTPPVQPCGL DLMAWYQPSR EDLQIGGDWY
DSFLTKNGCT TLVVGDVTGH DHVAAAAMGQ LRGLVRAIAF DSEQSPARIF ERADTAIAGL
DLGNHSTATA VVAQIEEPAP GSTGTSRTLR WSNAAHPYPA VVRADGSVEL LRRTNDIPLG
ITQGFDRREH EELLHEGDTL VLYTDGLVER RGEILSTGLA QLTDALADGH ARTIVDLAEH
VLSSLAPTPT DDVALVLVRV LPAGDAR
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