Gene Sked_05980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05980 
Symbol 
ID8632235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp677556 
End bp678854 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content74% 
IMG OID 
Productpredicted acetyltransferase 
Protein accessionYP_003313392 
Protein GI269793937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.307493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCAC ACTCCTTCAC CCTCGACCAC TTCCCCGCAG CAGCCGACGA CCGCACCCGC 
GCGTGGACGC GCGCCGTGCG CCAGGCCTTC CTCGAGCCCG ACCCGACGCC AGCCCGGCTG
GAGTACCTCG TCGAGCAGAC CGTGGCCGAC GACGCGACGC TCGTGGCGGC GTACCCCGAC
GGCGAGGAGA CCCTCGACGG TGAGCGGCGT CCGGTCGGGA CCTGCACGAC GATGGCCGGC
ACCATCAACC TCGGAGCCGG TCTGCTGCCC GCGACGCTCT TCACCTCGGC GACCGTCCGG
CCCACCCACC GGCGCCGCGG CCTGCTGCGC CGCATGGTCG AGGACGCCCT CGTGCGGACG
TCGGGTGCTG GGCACAGCAT GGTGCTGCTC ACCGCGACCG AGGGCAGCAT CTACGAGCGC
TTCGGCTTCG GCGCCGCCGT GTGGCGGTCG ACCCTCACCG TCGACACCCG CGGCGGCCTC
CCGCTGCGCT CGCGCGGCAG CGGTCAGGTG CAGCAGGTCG GCACGGAGTG GCTGGTCGGC
CAAGCCCCGG CGGTCTTCGA CAGGTTCCAC GAGGGAGCCC TCGGGTCGGT GAGCCGCCGG
GCCGCCTACA CCGACCGCGT CGCCCGCGAG AACGACAGCG ACCGGTTCGA CCGCGCCGTC
CGCGGGCTCG CGCACGTCGG CGACAGCGGC GAGGTGGACG GCTTCGCCTT CTACCGGTCC
CTCGAGGGCA CCGCCACCGT CGAGGTCCTC GACCTCGTCG CCGCCACGGA CGACGCCTAC
CTGGCGCTGT GGTCGACCCT CGGTGGGCTC GACCTCGTCG ACACGGTGAC CTTCCCCCGC
GCGTCGGCCG ACGAGGTGCT GCGGCACGCC GTGTCCGACC CCCGCCGGGT GTCGACGACC
CTGGTGCAGG ACGAGCTGTG GGTGCGGGTG GTCGACCCCG CCGCCGCGCT CGCGCAGCGT
GCCTACATGC CCGGCCTCGA CGAGTCCCTC GTGCTGCGGG TCTACGACCC GCTCGGCCAC
GCCGCAGGCG ACCTGCGGCT CCGCGTCGCG GACGGCGTCG CCGTGGTCGA GCCTGTCGTC
GTAGACGGTG CCGAGAACCG GGCGGAGGAC GGCCACGTCG ACGAGGACTG GGACCTGTCT
CTCGACGTGT CGACGCTCGG CACCCTGCTC GTGGGTGGCC TGTCGGCGAC CCAGCTCGCC
CGGTCGGCGC GGCTCGTCGC CCGCGACGGC GCAGCCCTCG CGCAGGCCGA CCGGGTCTTC
TCGATCGCCG ACACCCTGCG GTTCTACTCG CACTTCTGA
 
Protein sequence
MPAHSFTLDH FPAAADDRTR AWTRAVRQAF LEPDPTPARL EYLVEQTVAD DATLVAAYPD 
GEETLDGERR PVGTCTTMAG TINLGAGLLP ATLFTSATVR PTHRRRGLLR RMVEDALVRT
SGAGHSMVLL TATEGSIYER FGFGAAVWRS TLTVDTRGGL PLRSRGSGQV QQVGTEWLVG
QAPAVFDRFH EGALGSVSRR AAYTDRVARE NDSDRFDRAV RGLAHVGDSG EVDGFAFYRS
LEGTATVEVL DLVAATDDAY LALWSTLGGL DLVDTVTFPR ASADEVLRHA VSDPRRVSTT
LVQDELWVRV VDPAAALAQR AYMPGLDESL VLRVYDPLGH AAGDLRLRVA DGVAVVEPVV
VDGAENRAED GHVDEDWDLS LDVSTLGTLL VGGLSATQLA RSARLVARDG AALAQADRVF
SIADTLRFYS HF