Gene Sked_05750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05750 
Symbol 
ID8632212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp647642 
End bp649348 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313369 
Protein GI269793914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGG CACCCATCGG TCACCGACTC AGCACACCTC TCAGCCGACG CGGCTTCCTC 
AGCCTCACCG GTCTCGCGGC GATGACCGTG ACCCTCGCCT CGTGCTCCGG CGGCGGAGGT
GGCGGAGGAC GCCCGAACCC CCGCGAGGCC AAGGCCCTCG CCCTCCCCAC CTACGTCGCG
CCGCGCGAGG TCCCCGGCGG CATCGTCAGC GCGGTCGAGG GCATGCCGAC CATCTACACC
CAGCCCATCC AGGAGTACTA CGACTCCGTG ACCGCAGCGC CGCTCTCGGG CGGGAAGGTC
ACGACCTTCC AGGTCCTGTG GGGCGCACCG CCCCAGTCCG CCCCCGCCAA CGAGTACTGG
GCCGGGCTGA ACGAGCGCCT CGGCGGGACC TTCGAGCCCA CCCTGGTCGC CTTCGACACC
TACAACGAGA AGATGGCCAC GACCATCGCC TCGGGCAACG TCCCCGACCT CCTGTTCGTC
CAGGACACCA ACGCCGTCGC CGCCAAGGCG ATCAACGACG GCGTGTTCGC CGACCTCTCC
GAGGCGCTCG CCGGCGACGA GGTCCTGCGC TGGCCCAACC TCGCCAACGT CGGGTCGAAC
GCCTGGAAGG CCTCGGCCAA GAACGGGCAC CTGTTCGGCA TCCCGAACGA AGACCCGTAC
CTCACCAACT TCCCCGCGAT CCGCTGGGAC CTCATGGCCG CGGCCGGCTT CGACGAGATG
CCGGCCGACG CCGAGGGCTT CCTCGAGATG ATGACCGCCG TGGCCGACCT CAGGTCGGTG
AACGGCAAGC AGCACTGGGG CATCGGCGCC TTCGACGGCA AGCTCCAGGC CGTCGTCGAG
TGGATGTTCC GGGCCGGGAC CACGTGGCAG CTCGACGACT CGGGCAAGCT CGTCAACGTC
ATCGAGACCG ACGCCTACGC CGACGTCCTC GAGTACCACA CCAGGCTCTG GAAGGCCGGG
GTCTACCACC CTGACGCCCT GGCGCTCGCG ACGCAGGGCA ACAAGGCCGC CGAGATGTTC
ACCAACGGCC AGCTCGCCCT CACCGTCGAC TCCTTCAACG GGTACTTCGG CGCCAACATC
CTGCGCGACA CCGTCGACAT CACCGAGGGG GCCGACCCGC GCATGTTCGT CCCGCCGGCC
TTCGACGGCG GCGAGATCGT CGTGCAGCGC AACGACGGCT ACTGGGGCAT GGTCTCGATC
TCGGCGAGGG CCGCCGAGGA CCCGGAGCGC CTCGCGGAGC TGCTCGACGT CATCAACTAC
TGGCGCGCGC CCGACGGCAG CACCGAGGCC CTGTTCATCC ACACCGGCGC CGAGGGCTAC
AACTACGAGC TCGGCGAGGG CAATGCGATC GTCGACCTCG GCGACGAGAC CGCCAACAAC
GACCGCGCCG CGCTCCAGTG GCTCGGTGCG TTCAAGTCGC CGTCCTTCGT CGTGGCACCC
GCCTCGCTCG AGTTCGTCGA GAACTTCCAG CAGTCCCTCG AGCCGCTGGT CGCGGCGACC
GTGCCCAGCC CCGTCGTCGG CCTCTACAAC GAGCCCAACG TGAGCGAGGG CGCCAAGCTC
TCCGCGGTCG ACACCGACTA CCGCAACGGC ATCGTGTCCG GGCGCATGTC GCTCGACCAG
CTCGACGAGT ACCGCGACGC CTGGCGCAAG GCCGGCGGCG ACCAGGTCCG CGAGGCGTAC
GAGACCGCCC TCGCCGAGCA GGCCTGA
 
Protein sequence
MSSAPIGHRL STPLSRRGFL SLTGLAAMTV TLASCSGGGG GGGRPNPREA KALALPTYVA 
PREVPGGIVS AVEGMPTIYT QPIQEYYDSV TAAPLSGGKV TTFQVLWGAP PQSAPANEYW
AGLNERLGGT FEPTLVAFDT YNEKMATTIA SGNVPDLLFV QDTNAVAAKA INDGVFADLS
EALAGDEVLR WPNLANVGSN AWKASAKNGH LFGIPNEDPY LTNFPAIRWD LMAAAGFDEM
PADAEGFLEM MTAVADLRSV NGKQHWGIGA FDGKLQAVVE WMFRAGTTWQ LDDSGKLVNV
IETDAYADVL EYHTRLWKAG VYHPDALALA TQGNKAAEMF TNGQLALTVD SFNGYFGANI
LRDTVDITEG ADPRMFVPPA FDGGEIVVQR NDGYWGMVSI SARAAEDPER LAELLDVINY
WRAPDGSTEA LFIHTGAEGY NYELGEGNAI VDLGDETANN DRAALQWLGA FKSPSFVVAP
ASLEFVENFQ QSLEPLVAAT VPSPVVGLYN EPNVSEGAKL SAVDTDYRNG IVSGRMSLDQ
LDEYRDAWRK AGGDQVREAY ETALAEQA