Gene Sked_05330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05330 
Symbol 
ID8632170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp588371 
End bp590017 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content75% 
IMG OID 
Productmannitol-1-phosphate/altronate dehydrogenase 
Protein accessionYP_003313327 
Protein GI269793872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA CCGACCAGAC CAGCACGCAG CCTCCCGCGA CGGACCGCCT GACCCTCCAT 
ACCTACGGGG AGGTCTCGCA GCGGTCCGGT GTCACGGGGC CGGCGGTCGA CCCGTCGGCC
GTGACCGTCG GGATCGTGCA CCTCGGCATC GGGGCGTTCC ACCGCGCGCA CCAGGCGGTG
TTCACCGAGG ATGCCGCGGC GGCCGCCGGT GAGACCGGCT GGGGGATCCT CGGGGTCACC
CAGCGCTCGA CCGCGGTGGT CGACCAGCTC GTGCCGCAGG ACGGCCTGTA CGGCGTGCGG
ACCGTCGGCA AGGACTCGTC CTCCCTGCGC CTCGTCGGCT CCGTGCGCGG CGTCGCGTTC
CCGGGCGAGG AGACGCAGCG GGTGCTCGAC GCGATCGCCG CGCCGACCAC GCACGTCGTG
ACGCTGACCG TGACGGAGAA GGGCTACCGC GCGGGGGCCG ACGGCCGGCT CGACCTCGGG
GACCGAGACG TCCTCGCCGA CCTCGAGGCG CTCGTCGGCG AGAGCCGCGG GGCGGACGCG
CTCGCACGCC AGACCGGCAC CGCGGTGCAG GGCGGGGCGA CGACGCCCGA CGTCGTCGAG
GACGCCGTGC CGGCACGCAG CGCGATCGGC CTGCTGGTCC GCGGGCTCGC GGCGCGAGCA
CGCGCCGGTG GTGAGCCCCT GACGGTGCTC ACCTGCGACA ACCTGCTCGA CAACGGTCAC
GTGCTCGAGG GTCTCGTCGG CCAGGCTCTC GACGCCGCGG CCGGGCTGCC CGGCGCAGAC
CTGGAGCAGG TCGAGCGGCT GCGGGCGTGG CTGCGCGCCT CGGTGACCTT CCCGTGCACC
ATGGTCGACC GCATCGTGCC CGCCACGACC GAGGGCGACC GCGCCGCGGC CGAGGAGGCG
ACGGGAGTGC GCGACGAGGG TCTCGTGGTC GCCGAGCCGT TCATGCAGTG GGTCATCGAG
GACAGGTTCG CCGGTCCTCG GCCCGCGTGG GAGCTCGCCG GAGCCACGCT CACCGACGAC
GTCGCGCCCT TCGAGCGGGC CAAGCTGCGC ATGCTCAACG GCACGCACTC GCTGCTCGCC
TACCTGGGCT CGATCGCCGG GCACCGGCTC ATCGCCGACG CCGTCGCTGA CCCCGAGCTA
CTCGCGGCGG CCCGGTCGCT GCTCGTCGAC GACGTCACGC CGACGCTCGT CGCACCGCAG
GGTCTCGACC TCGCCACCTA CGCGGAGTCG CTCCTCGAGC GCTTCGCCAA CCCCGCGCTG
GGCCACACGA CGATCCAGGT GGCGATGGAC GGCTCCAAGA AGCTGCCCAT CCGTTTCCTC
GCCACGGCCG CCGACAGGCT CGCTGACGGC GCCGTCCCCG ACGCGGTGGC GCACGGCGTC
GCGGGCTGGG TCGTGTTCGT CGCGGTCGGC CGCACGGTCG CCGGCGAGCC GCTGCGCCTC
GACGACCCGA TCGCCGACGA GCTGCGGGCC GCCGCGGCCG AGGTCGCGGG GCCCGACGAG
GTGGGACCGG TCCACGCCGA GGCCCTGGTG CGGCGGATGC TCGCGGTCGA GCAGGTGTTC
CCCGCCGAGG TCCGCGACCA CGCCGGCTTC CGGGACGCCG TCGTCGCCCA CACCGAGCGG
CTGCTCGCGG GGTACCCGGG TCGCTGA
 
Protein sequence
MTSTDQTSTQ PPATDRLTLH TYGEVSQRSG VTGPAVDPSA VTVGIVHLGI GAFHRAHQAV 
FTEDAAAAAG ETGWGILGVT QRSTAVVDQL VPQDGLYGVR TVGKDSSSLR LVGSVRGVAF
PGEETQRVLD AIAAPTTHVV TLTVTEKGYR AGADGRLDLG DRDVLADLEA LVGESRGADA
LARQTGTAVQ GGATTPDVVE DAVPARSAIG LLVRGLAARA RAGGEPLTVL TCDNLLDNGH
VLEGLVGQAL DAAAGLPGAD LEQVERLRAW LRASVTFPCT MVDRIVPATT EGDRAAAEEA
TGVRDEGLVV AEPFMQWVIE DRFAGPRPAW ELAGATLTDD VAPFERAKLR MLNGTHSLLA
YLGSIAGHRL IADAVADPEL LAAARSLLVD DVTPTLVAPQ GLDLATYAES LLERFANPAL
GHTTIQVAMD GSKKLPIRFL ATAADRLADG AVPDAVAHGV AGWVVFVAVG RTVAGEPLRL
DDPIADELRA AAAEVAGPDE VGPVHAEALV RRMLAVEQVF PAEVRDHAGF RDAVVAHTER
LLAGYPGR