Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_05300 |
Symbol | |
ID | 8632167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 584281 |
End bp | 585309 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family |
Protein accession | YP_003313324 |
Protein GI | 269793869 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG CACTCTCCGC ACGGACACCG ACCTCACCGA CCGCCTCGCA GACGGACGAC AGCTTCGTCC TGTCGACCGA CGAGGAGGAC GCTCCGGCGC CCACAGTACT CGCGGCCGGC GCGACGGCCG ACCCGGTCAA GGACTACCTC AAGATCATCG GGCGCGTCCC CCTGCTCAAC GCCGAGCAGG AGATCGAGAT CGCCATGCGC ATCGAGGCGG GCATGCTCGC CGCGCACTAC CTCGAGTCCG GGGAGTACCC CAAGGGCGCC ACCAAGCGTG AGCTCGAGGT CATCACCGCC GACGGCGTCC GCGCCAAGAG CCACCTCGTC GAGGCCAACC TGCGCCTCGT GGTGTCGATC GCCAAGAAGT ACACCGGCCG CGGCCTGCTG TTCCTCGACC TCATCCAGGA GGGCAACACC GGCCTCATCC GCGCGGTCGA GAAGTTCGAC TACGCCAAGG GCTTCAAGTT CTCGACCTAC GCCACGTGGT GGATCCGCCA GGCCATCACC CGCGGCATGG CCGACCAGGC CCGCACCATC CGTATCCCGG TGCACATGGT CGAGGTCATC AACAAGGTGT CCCGCGCTCA GCGCCAGATG CTCCAGGACC TCGGCCGCGA GCCGACGCCC GAGGAGCTCG CGCTCGAGCT CGACATGACG CCCGAGAAGG TCCTCGAGGT GCAGAAGCAC GGTCGTGAGC CCATCTCGCT CCACACCCCC CTCGGTGAGG AGGGCGGCAG CGAGTTCGGC GACCTCATCG AGGACACCGA GGCCGTGGTC CCCGCGGACG CCGTGAACTT CAGCTTCCTG CAGCAGCAGA TCCACGGGAT CCTCGACACC CTGTCCGAGC GCGAGGCCGG CGTCATCACC ATGCGCTACG GCCTCACGGA CGGTCTGCCC AAGACCCTCG ACCAGATCGG GCACGTGTAC GGCGTGACGC GCGAGCGCAT CCGCCAGATC GAGTCCAAGA CGATGTCCAA GCTGCGCCAC CCCAGCCGCT CCCAGGTGCT GCGCGACTAC CTCGACTGA
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Protein sequence | MTTALSARTP TSPTASQTDD SFVLSTDEED APAPTVLAAG ATADPVKDYL KIIGRVPLLN AEQEIEIAMR IEAGMLAAHY LESGEYPKGA TKRELEVITA DGVRAKSHLV EANLRLVVSI AKKYTGRGLL FLDLIQEGNT GLIRAVEKFD YAKGFKFSTY ATWWIRQAIT RGMADQARTI RIPVHMVEVI NKVSRAQRQM LQDLGREPTP EELALELDMT PEKVLEVQKH GREPISLHTP LGEEGGSEFG DLIEDTEAVV PADAVNFSFL QQQIHGILDT LSEREAGVIT MRYGLTDGLP KTLDQIGHVY GVTRERIRQI ESKTMSKLRH PSRSQVLRDY LD
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