Gene Sked_05190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05190 
Symbol 
ID8632156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp571947 
End bp572906 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313314 
Protein GI269793859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.455311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCGC ACCTCCCGCC CGGTGCCGCC GGTGCGGTCC GCGCGGCGGC TGCCGAGCCC 
GCGTCCGGGC TGGACCAAGC AGCGCCCGGT GCACCCGTGT GGCGGGTCGA CGGCGACACC
GTCGTGCTCG ACCGCGACGG TCTCCCCCTC GCCCGGTACA CCGCGGGCCA CGGCGTGCCT
GCCGTCCACG CACCGCGACC GCACCTGCAC CCGGTCCACA CGCTCGCCGG TGCCCTGATG
ACCGAGGCGA GCCCCGTCGA CCACCGCCAC CACTACGGCT TCTCGGTCGC GATCCCGGAG
GTCAACGGGA CGAGCTTCTG GGGCGGGCGC ACCTTCGTGC GCGACGTCGG ACCGACGCTG
CTGCCCAACC ACGGCCAGCA GGTCTCCGCA CCCGTGACGC TGTCCTCCGC GGTGACCGGG
ACGCTCGACG ACGCGGTGAC GTGGCTCGAC CAGCACGGCG ACCCGCTGCT GTCCGAGCGC
CGCAGCATCC GCGGGGCCGT CCTGCCCGGG TCCGACGGCT GGTCACTGCG CTGGACGAGC
GACCTCGTCG CCGACCACGG CGACCTGACG ATCACCAGCC CGGGCGCCAC CGGACGGCCC
GGCGCCGGGT ACGGCGGCCT CTTCTGGCGG TCGTCCCCGT CCGACGAGAC CGTCGTGCTC
AGCCACGGGG GCGAGGGCGA GAGCACCGCG CACGGGTCGC GGTCGCCGTG GGTCGCGCTC
GCGCAGCGGC GCGGCGACTC GTGGACCACG CTGCTGCTCG TCCAGCCGGG AGGGCCGTCC
CCGTGGTTCG TCCGCGCCGC CACCTTCCCC GGGGCGGGCC CGGCCCTCGC GTGGGACGCG
CCCCTGACCG TCGAGGCCGG TCAGACCCTG CGGCTCGACC TCACGGCCGT CCTGCTCGAC
CGCCGCCTCG ACCTCCGCGC AGCCGGCGCC CTCGCCGAGG AGCACTCCTG CGTACAGTAG
 
Protein sequence
MPPHLPPGAA GAVRAAAAEP ASGLDQAAPG APVWRVDGDT VVLDRDGLPL ARYTAGHGVP 
AVHAPRPHLH PVHTLAGALM TEASPVDHRH HYGFSVAIPE VNGTSFWGGR TFVRDVGPTL
LPNHGQQVSA PVTLSSAVTG TLDDAVTWLD QHGDPLLSER RSIRGAVLPG SDGWSLRWTS
DLVADHGDLT ITSPGATGRP GAGYGGLFWR SSPSDETVVL SHGGEGESTA HGSRSPWVAL
AQRRGDSWTT LLLVQPGGPS PWFVRAATFP GAGPALAWDA PLTVEAGQTL RLDLTAVLLD
RRLDLRAAGA LAEEHSCVQ