Gene Sked_05160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05160 
Symbol 
ID8632153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp570160 
End bp570921 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003313311 
Protein GI269793856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAACTC ACGAGCGTGT GCTGGCCCGC ATCGAGGCGG ACCTCTCCGC AGGTCGGTGG 
GCCGTGGGCG AGCGGCTTCC CGGCGAGCGG GCGATGGCCG AGGAGCTCGG CGTGTCCCGC
CCGTCGGTGC GCGAGGCGCT GCGCGTGCTC GAGGCGATGG GGATCGTGCG GACCGCGGTC
GGCTCAGGTC CGGACTCGGG TGCGACGGTC GTCAACCACC CTGCGGCAGG GCTCGGCTCT
GCCGTGCGGC TGCACCTCGC CTCGGGCGCG CTGCCGGTCC ACGACGTCGT CGAGCTGCGG
GTGCTGCTCG AGACCTGGGC GGTCTCGAGC GCCGCGCGGC GGACCCCGGC GCCGTCCTTC
GACGACGCCG AGGCGCTGCT CGACCAGATG GACGCCCCGG GGACGAGCGT CGAGGAGTTC
CTCGAGCTCG ACACCGCCTT CCACGTGGCC CTGGCCGCGG CGTCGGGGAA CGTGCTCGTC
GAGGCGGTCA TGCTCGGGCT GCGCGGGGCC ATCGGCGCCT ACGTGGCCGA GGGCACCGCA
CGGCTGACCG ACTGGCCGGC CACCGCGGCG CGGCTGCGCT CGGAGCACCG TGAGGTGCTC
CGAGCGGTGC GCGAGGGCGC GGCGGCCGAG GCAGGTGCTG CCGTCGCGGC GCACATCGAC
GGCTTCTACC GCGAGGCGGG TCTCGAGCGA CCCGGGGACG CCGGTGGCAC GGCCGGACCA
GACGGTCCCG GTCCGGCCGA CGAGGTCAGT GCACGACCTT GA
 
Protein sequence
MRTHERVLAR IEADLSAGRW AVGERLPGER AMAEELGVSR PSVREALRVL EAMGIVRTAV 
GSGPDSGATV VNHPAAGLGS AVRLHLASGA LPVHDVVELR VLLETWAVSS AARRTPAPSF
DDAEALLDQM DAPGTSVEEF LELDTAFHVA LAAASGNVLV EAVMLGLRGA IGAYVAEGTA
RLTDWPATAA RLRSEHREVL RAVREGAAAE AGAAVAAHID GFYREAGLER PGDAGGTAGP
DGPGPADEVS ARP