Gene Sked_05080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05080 
Symbol 
ID8632145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp560708 
End bp563284 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content68% 
IMG OID 
ProductATPase with chaperone activity, ATP-binding subunit 
Protein accessionYP_003313303 
Protein GI269793848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA GATTCACCGA CCGAGCCCGT CGGGTGGTCG TCCTTGCCCA AGAAGAGGCA 
CGGATGCTCA ACCACAACTA CATCGGTACC GAGCACATCC TGCTCGGCCT CATCCACGAG
GGCGAGGGTG TCGCGGCGAA GGCCCTGGAG TCCCTCGGCA TCTCCCTCGA CGCCGTGCGG
TCACAGGTCA CCGAGATCAT CGGCGAGGGC CAGCAGGCCC CCTCGGGCCA CATCCCCTTC
ACGCCGCGCG CCAAGAAGGT GCTCGAGCTG TCCCTGCGCG AGGCCCTGCA GCTCGGCCAC
AACTACATCG GCACCGAGCA CATCCTGCTC GGCCTCATCC GTGAGGGCGA GGGCGTCGCC
GCCCAGGTCC TCACGAAGCT GGGCGCCGAC CTCAACCGCG TGCGCCAGCA GGTCATCCAG
CTGCTCTCGG GCTACCAGGG CAAGGAGCCC GTCGCCTCGG GCGCACCTGC CGAGGGCACC
CCGGCCGGCT CCGCCGTGCT CGACCAGTTC GGCCGCAACC TCACGCAGGC TGCCCGCGAG
GGCAAGCTCG ACCCCGTGAT CGGTCGCGCC AAGGAGATCG AGCGCGTCAT GCAGGTTCTC
AGCCGACGCA CCAAGAACAA CCCGGTGCTC ATCGGTGAGC CTGGCGTCGG CAAGACGGCC
GTCGTCGAGG GCCTCGCCCA GGACATCGTC TCCGGCGACG TCCCCGAGAC GCTCAAGGAC
AAGCAGCTCT ACACGCTCGA CCTCGGCTCG CTGGTGGCCG GGTCCCGCTA CCGCGGTGAC
TTCGAGGAGC GCCTGAAGAA GGTCCTCAAG GAGATCCGCA CCCGCGGCGA CATCATCCTG
TTCATCGACG AGATCCACAC CCTCGTGGGT GCGGGTGCCG CCGAGGGCGC CATCGACGCC
GCGTCGATCC TCAAGCCGAT GCTCGCCCGC GGGGAGCTCC AGACCATCGG AGCCACCACC
CTCGACGAGT ACCGCAAGCA CATCGAGAAG GACGCCGCCC TCGAGCGCCG GTTCCAGCCG
GTCCAGGTCG CCGAGCCGTC CCTCCCGCAC GCGATCGAGA TCCTCAAGGG TCTGCGCGAC
CGCTACGAGG CGCACCACCG CGTCTCCATC ACGGACTCCG CGCTCGTGGC GGCGGCGACC
CTCGCCGACC GTTACGTCAA CGACCGCTTC CTCCCCGACA AGGCCATCGA CCTCGTCGAC
GAGGCGGGCG CGCGTCTGCG CATCCGTCGC ATGACCGCTC CGCCGGAGCT GCGCGAGCTC
GACGAGCAGA TCGCCGAGGC GCGCCGCAAC AAGGAGTCGG CCATCGACGA GCAGGACTTC
GAGAAGGCCG CCGGCCTGCG TGACACCGAG AAGCAGCTCA CGCAGCAGCG CGCCGACAAG
GAGAAGGCCT GGAAGTCCGG TGACCTCGAC ACGGTCGCCG AGGTGGACGA AGAGCTCATC
GCCGAGGTGC TGGCCATGTC GACCGGCATC CCGGTCTTCA AGCTCACCGA GGAGGAGTCC
TCGCGTCTGC TGAAGATGGA GGACGAGCTG CACAAGCGCG TCGTCGGTCA GGACATCGCC
ATCAAGGGCC TGTCGCAGGC GATCCGCCGT ACGCGTGCTG GCCTCAAGGA CCCGAAGCGT
CCCGGTGGCT CGTTCATCTT CGCCGGTCCG ACCGGTGTCG GTAAGACCGA GCTCGCCAAG
GCGCTCGCCG AGTTCCTCTT CGGCGACGAG GACGCGCTCA TCCAGCTCGA CATGTCGGAG
TTCTCGGAGA AGCACACCGT CTCGCGCCTC TTCGGCTCGC CTCCCGGCTA CGTCGGCTAC
GACGAGGGTG GCCAGCTCAC CGAGAAGGTG CGTCGCAAGC CGTTCTCCGT GGTCCTCTTC
GACGAGGTCG AGAAGGCGCA CGCGGACATC TTCAACTCGC TCCTGCAGAT CCTCGAGGAC
GGTCGCCTGA CCGACTCGCA GGGCCGCATG GTCGACTTCA AGAACACCGT GATCATCATG
ACCACCAACC TCGGTACCCG TGACATCGCC AAGGGCGTCC AGACCGGCTT CAACGCCGGC
GGCGACACCG TGACGAGTTA CGAGCGCATG AAGGCCAAGG TCAACGAGGA GCTCAAGCAG
CACTTCCGCC CCGAGTTCCT CAACCGTGTC GACGACACCA TCGTGTTCCC GCAGCTCACG
CAGGACGAGA TCGTCAAGAT CGTCGACCTC ATGATCGCGA AGCTCGACGG CCGTCTGCGC
GACAAGGACA TGGGCATCGA GCTCACGCCC GCCGCCAAGA TCCTCCTCTC CGAGAAGGGG
TACGACCCGG TCCTGGGTGC ACGGCCGCTG CGCCGCGCCA TCCAGCGCGA GATCGAGGAC
GTCCTGTCGG AGAAGATCCT CTTCGGCGAC ATCAAGGCCG GCGAGATGAT CCTCGTCGAC
GCCGAGGGCG AGGGTCTGCT GGGCGAGTTC TCGTTCCGCG GGGTCCCCAA GAACCTGCAC
AAGCGTGACG CCGTCGTCGT GGCTGCCGCC GCAGCGACCG GCGGGTCCGA CGGCCCGGTG
GGCCTGAGCG ACCTCCCGCC GACCGGTGGG ACCTCAGCCG CGGCCGACCC CGCCTGA
 
Protein sequence
MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLDAVR 
SQVTEIIGEG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLTKLGAD LNRVRQQVIQ LLSGYQGKEP VASGAPAEGT PAGSAVLDQF GRNLTQAARE
GKLDPVIGRA KEIERVMQVL SRRTKNNPVL IGEPGVGKTA VVEGLAQDIV SGDVPETLKD
KQLYTLDLGS LVAGSRYRGD FEERLKKVLK EIRTRGDIIL FIDEIHTLVG AGAAEGAIDA
ASILKPMLAR GELQTIGATT LDEYRKHIEK DAALERRFQP VQVAEPSLPH AIEILKGLRD
RYEAHHRVSI TDSALVAAAT LADRYVNDRF LPDKAIDLVD EAGARLRIRR MTAPPELREL
DEQIAEARRN KESAIDEQDF EKAAGLRDTE KQLTQQRADK EKAWKSGDLD TVAEVDEELI
AEVLAMSTGI PVFKLTEEES SRLLKMEDEL HKRVVGQDIA IKGLSQAIRR TRAGLKDPKR
PGGSFIFAGP TGVGKTELAK ALAEFLFGDE DALIQLDMSE FSEKHTVSRL FGSPPGYVGY
DEGGQLTEKV RRKPFSVVLF DEVEKAHADI FNSLLQILED GRLTDSQGRM VDFKNTVIIM
TTNLGTRDIA KGVQTGFNAG GDTVTSYERM KAKVNEELKQ HFRPEFLNRV DDTIVFPQLT
QDEIVKIVDL MIAKLDGRLR DKDMGIELTP AAKILLSEKG YDPVLGARPL RRAIQREIED
VLSEKILFGD IKAGEMILVD AEGEGLLGEF SFRGVPKNLH KRDAVVVAAA AATGGSDGPV
GLSDLPPTGG TSAAADPA