Gene Sked_04860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04860 
Symbol 
ID8632123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp542280 
End bp544571 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content69% 
IMG OID 
Productmembrane carboxypeptidase (penicillin-binding protein) 
Protein accessionYP_003313281 
Protein GI269793826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.820236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTT CTGCGCTCGA TGGCGGCTCG CTCACGCCCG AGGACGACGG CGACGGTGGT 
TCGACGACCG CTCGGCGGCC CCGTCACACG GTCAACCCCT TCCAGGCGCT CGCGCTGCTG
CTGACCTTCG TGCTGCTCGC CGGGGTCGGC GGGCTGCTCA TGGCGGGCCT GGTCATCCCC
GTGGCGGCCG CCACGAGCAC CGTGACCAAC GGTGGTGTCG AGGCCTTCAA CGACCTGCCG
ACCGAGCTCG AGCCGCAGCC CCTCGCGCAG GCGTCCAACA TCTACGCCGC GGACGGCACC
ACGCTGCTCG CCCGGCTGTA CTCGGACAAC CGCGAGGTGG TCCCGCTCGA CCAGATCTCG
GAGAACCTCC AGCACGCCGC GATCGCCGTC GAGGACCGCC GCTTCTACAC CCACGGCGGC
ATCGACCCGC AGGGCATGGC CCGCGCGCTG GTCTCGAACC TCCGCGGTGG TGACGACCAG
CGCCAGGGTG CGTCGACGCT GACGCAGCAG TACGTCAAGA ACGTGCTCAT CGACCTCGCC
AAGCGCGAGG ACGACCTCGC CGCCGTCCAG GCCGCCTCCG AGAGCACGGT CTCGCGCAAG
CTCCGCGAGG CGAAGCTGGC CATCGCGCTC GAGAAGCGCA TGACCAAGGA CGAGATCCTC
GAGGGCTACC TCAACATCGC GCAGTTCGGC TCGTCCGTCT ACGGCGTCCA GGCCGCCTCG
CAGCGGTACT TCGGCGTCGA CGCGTCCGAC CTGTCGATCG TCCAGGCCGC GACCATCGCC
GGCATCACGC AGAGCCCCAA CGCGAACGAC CCGATCCGCA ACCCGGACAA CTCGGAGCGC
CGCCGCAACG CCGTCCTCAA GTCGATGTAC GAGGTGCAGT ACATCACCAA GGACGAGTAC
GACGAGGCAC GGACGACGCC GCTCGACCAG ACGCTCAACC CGCAGCCCAT CAACCAGGGC
TGCGAGGGCG CTGGTGGCGC GATCAACGCC GGGTACTTCT GCGACTACGT CACCAAGGTC
ATCATGTCGG ACCCGGTCTT CGGCGAGGAC CGTGCCGACC GCTACGCGCT GCTCTACCAG
GGCGGGCTCA ACATCACCAC GACGCTCAAC GTGGGCATCC AGGAGATCAT CAACCGTGAG
CTCCAGGGCA GCGTGCCCGT CGACAACGAG TACGGCTTCG CGATCGCCGG CGCGATGGTC
GCCCCGGGCA GCGGCCAGAT CCTCGGGATG TCGCAGAACA GCACGTACTC CACGGACGAG
TCCGCCCAGT ACTCCACCCA GGTCAACTAC AGCACCGGCA GCGCCTACGG CGGGTCCAAC
GGCTTCCAGC CCGGGTCGAC CTTCAAGGCC TTCGTCCTCG CCCAGTGGTT CGAGTCCGGG
CACACGCTGC GCGAGACCGT GAGCGCCAAC GAGCGCCGTT GGACGGTGGC GGACTTCCTC
GAGAACACGC CTGCTGCGTC CTGCGACGCC TCGCTGCCGG GCACAAAGCC GTGGCAGCCG
AAGAACGCCG ACGGCAAGGC CGGCGGGAAC ATCTCCGTCG CGCGGGCCAC GAACGACTCG
GTCAACACCG CGTACGTCGC GATGCAGGCA CAGATGAACC TCTGCGACAT CGCCGCGACC
GCCGACCGCA TCGGCTTCGC TCCCGCGGAC GGCGGAGCGG TCCAGCCCCG GATGACGATG
ACGCTCGGTA CGCAGGAGAC GTCTCCGCTC GGCATGGCAA ACGCCTACGC GACCTTCGCC
AGCGGCGGCG TCCGCTGCGA CCCGGTCGCG ATCCTGTCGG TGACCCGCGG CGACGAAGAG
CTCCCGATCC CCTCCGCCAA CTGCACCGAG GCGCTCAGCA CGGCGACGGC GAACGCCATG
AACTACGCCC TCGAGGGCGT GCTCAAGGAG GGCGGGGCCA AGAAGTCGGC GCTCGCCGGC
CGCACCGCAG CGGGCAAGAC GGGTACCACC AACAGCAACA ACGACGCGTG GTTCGTCGGC
TACACCAAGG AAGCCTCGAT GGCCATCTGG ATGGGCCACC CGCTCAAGGA GCGCTCGCTC
GCCGACTCGC GGATCAACGG CGTGTACAAC CAGTTCGTCT ACGGCTCGAC GATCGCCGCT
CCCACCTGGA AGCGCATCAT GGACCAGGCC GTCGGCGGCA ACGAGGACGT ACCCCTGAGT
GACGCCATCG CCCCCGAGCA GCTCGGCCAG GCTCCCGCAC CTCGGGCACC AGCGGCCCCC
GAGGCCCCGG CAGCCCCTGC CGCACCCGAG GGCGAAGCGC CTCCCGAGGC ACCCGCTCCG
GCCGAGGGCT GA
 
Protein sequence
MASSALDGGS LTPEDDGDGG STTARRPRHT VNPFQALALL LTFVLLAGVG GLLMAGLVIP 
VAAATSTVTN GGVEAFNDLP TELEPQPLAQ ASNIYAADGT TLLARLYSDN REVVPLDQIS
ENLQHAAIAV EDRRFYTHGG IDPQGMARAL VSNLRGGDDQ RQGASTLTQQ YVKNVLIDLA
KREDDLAAVQ AASESTVSRK LREAKLAIAL EKRMTKDEIL EGYLNIAQFG SSVYGVQAAS
QRYFGVDASD LSIVQAATIA GITQSPNAND PIRNPDNSER RRNAVLKSMY EVQYITKDEY
DEARTTPLDQ TLNPQPINQG CEGAGGAINA GYFCDYVTKV IMSDPVFGED RADRYALLYQ
GGLNITTTLN VGIQEIINRE LQGSVPVDNE YGFAIAGAMV APGSGQILGM SQNSTYSTDE
SAQYSTQVNY STGSAYGGSN GFQPGSTFKA FVLAQWFESG HTLRETVSAN ERRWTVADFL
ENTPAASCDA SLPGTKPWQP KNADGKAGGN ISVARATNDS VNTAYVAMQA QMNLCDIAAT
ADRIGFAPAD GGAVQPRMTM TLGTQETSPL GMANAYATFA SGGVRCDPVA ILSVTRGDEE
LPIPSANCTE ALSTATANAM NYALEGVLKE GGAKKSALAG RTAAGKTGTT NSNNDAWFVG
YTKEASMAIW MGHPLKERSL ADSRINGVYN QFVYGSTIAA PTWKRIMDQA VGGNEDVPLS
DAIAPEQLGQ APAPRAPAAP EAPAAPAAPE GEAPPEAPAP AEG