Gene Sked_04830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04830 
Symbol 
ID8632120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp539776 
End bp541074 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content71% 
IMG OID 
Productanaerobic c4-dicarboxylate membrane transporter family protein 
Protein accessionYP_003313279 
Protein GI269793824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.664542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTCG TCGAGCTCGC CGTTGTCCTC GCTGCGATCG TCCTGGGCGC GCGCCTCGGC 
GGGATCGGCA TCGGGTACGC GGGCGGTGCC GGGGTGCTCG TCCTCGGCCT GCTGGGCGTG
AGCCCGGGGA CCGCGCCCTT CGACGTCATC TCGATCATCA TGGCGGTCAT CGCCGCGATC
GCCGCCATGC AGGTGGCCGG GGGCATGGAC CACCTGGTGC ACCTCGCCGA CCGGCTGCTG
CGGCGCCGGC CGCAGCAGAT CACGTACTAC GCCCCGCTCG TCACCTACGG CATGACCCTC
ATGGCCGGGA CGGGGCACAC GGCCTTCTCG ACGCTCCCGG TGATCTCCGA GGTGGCCAAG
GAGAACGGCG TCCGGCCGTC GCGCCCGCTG TCGATCGCGG TGGTGGCCTC GCAGGTCGCC
ATCACGGCGT CGCCGGTCTC GGCGGCGGTG ATCTTCGTGG CGGCGGTCCT CGAGCCCTTC
GGCGTCGACT ACCTGCAGGT CCTCGCGGTC TCGATCCCGT CCACCCTGCT CGCCGTGGTC
CTGGCCTCGC TCGTCACCAA CCGGCTGGGC AAGGACCTCG CGGACGACGA CGAGTACCAG
GCGCGCCTCG CACGCGGTGA GATCACCTTC CGGCCGCAGA CGGAGTACGT GGCACGCCCC
GGTGCCCGGC GGTCCGTCGT GATCTTCCTC GTCGGGATCG TGGCGGTGAT GTCGTACGCG
ACCGCCGTCA GCGAGAACGT CGGCCTCATC GCCGACCCGG CCCTCGCCCG CAACGAGGCG
ATCCTCGTCA TCATGCTCAC GGTCGCGACC GTCATCACCG TCACCTGCGG CGTGAGCACC
CCGAAGATCC TCGAGATGTC GACCTTCCGG TCGGGGATGA GCGCGTGCGT CTGCGTCCTC
GGTGTCGCGT GGCTCGGCGA CACCTTCGTC CAGCACAACC TCGAGACTAT CCAGTCGGTC
TCGGGCGGCG CCCTCGACGC ACAGCCCTGG CTGCTCGCCG TGGTGCTGTT CTTCGCGTCG
GCGCTGCTCT ACTCGCAGGC GGCGACGGCG TCGGCCCTCA TGCCCGCGGC TCTCGCCCTC
GGCGTCAGCC CGCTGACGGC GGTCGCCTCC TTCGCGGCCG TGTCGGCGCT GTTCGTCCTG
CCGACCTACC CGACGCTGCT CGCGGCGGTC GAGCTCGACG ACACCGGCTC GACGAAGATC
GGGAAGCTCG TGTTCAACCA CCCGTTCATC GTCCCGGGGA CCCTCACCAT CGTCCTCGCG
GTGCTGCTGG GCTTCGCCGT CGGGAGCGTC GTGCTCTAG
 
Protein sequence
MVVVELAVVL AAIVLGARLG GIGIGYAGGA GVLVLGLLGV SPGTAPFDVI SIIMAVIAAI 
AAMQVAGGMD HLVHLADRLL RRRPQQITYY APLVTYGMTL MAGTGHTAFS TLPVISEVAK
ENGVRPSRPL SIAVVASQVA ITASPVSAAV IFVAAVLEPF GVDYLQVLAV SIPSTLLAVV
LASLVTNRLG KDLADDDEYQ ARLARGEITF RPQTEYVARP GARRSVVIFL VGIVAVMSYA
TAVSENVGLI ADPALARNEA ILVIMLTVAT VITVTCGVST PKILEMSTFR SGMSACVCVL
GVAWLGDTFV QHNLETIQSV SGGALDAQPW LLAVVLFFAS ALLYSQAATA SALMPAALAL
GVSPLTAVAS FAAVSALFVL PTYPTLLAAV ELDDTGSTKI GKLVFNHPFI VPGTLTIVLA
VLLGFAVGSV VL