Gene Sked_04590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04590 
Symbol 
ID8632096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp513956 
End bp514975 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type enterochelin transport system, permease component 
Protein accessionYP_003313257 
Protein GI269793802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.279632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.137174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC AGGACCCCGC ACCCGCCGCC GCGGCGTCAG CGCAGGCCCC GACCACCGGC 
CCGGACGCAG GTCCGGGTCG GCGGTCGGCC CTCCCGCTGA CCGTCGCCGT CCTCGTCACC
CTCGCCCTCG TGGTGGTGTC GCTCTTCGTG GGCGTCTACG ACCTGCGGGC CGAGGGCGGC
GCCGAGATGT TCGCCATCAC CCGCGTGCCC CGCACCGTCG CCCTGGTGCT CGCCGGCAGC
GCGATGGCCG TGAGCGGGCT GGTCCTCCAG CAGCTCACCC AGAACCGGTT CGTCGAGCCC
ACCACCATCG GCACGAGCGA GTGGGCCGGC CTCGGCCTGC TGCTCTCCGT GATCGTCCTC
CCGACGGCCA GCATCTCGAC CCGGATGGTG ATCGCGAGCC TCTCCGCCTT CGTCGGGACC
ATGGTCTTCA TGGCGATCCT GCGCCGCATC CCGGTGCGCA CCACCCTCGT GGTCCCCGTC
GTCGGGATCA TGCTCGGCGC CGTGGTCAGT GCCCTGACCA CCCTCGTCGC GATCTCCACG
AACTACCTGC AGCTCCTCGG GACCTGGTTC ATGGGCAGCT TCACCAGCGT GGTCCGCGGC
CAGTACGAGA TGCTGTGGGT GGTCGCCGTC GTGTGCGGGG CGATCTTCGT CCTGGCCGAC
CGGCTCACCG TCGCCGGTCT CGGGCGCGAG GTCGCGACCA ACCTCGGGGT CCGCTACGAC
CGCCTGATCC TGCTCGGCAC GGCCCTGGTG GCCGTCGCCT CCGGGGTCAC GACCGTCGTC
GTGGGGTTCC TGCCGTTCCT CGGGCTCGTG GTCCCCAACG TCGTCTCGCT GCTGCGCGGC
GACGACCTGC GGTCGAACCT CCCGTGGGTG TGCCTCGGCG GCATCGCGCT CGTCACCGTC
TGCGACATCG TGGGTCGCAC GGTGCGGATG CCCTTCGAGG TGCCGGTCTC GATGGTCCTC
GGGCTCGTCG GCGCCGTCGC CTTCGTCGCC CTCGTGCTCC GGGTGCAGCG CCGTGGCTGA
 
Protein sequence
MNAQDPAPAA AASAQAPTTG PDAGPGRRSA LPLTVAVLVT LALVVVSLFV GVYDLRAEGG 
AEMFAITRVP RTVALVLAGS AMAVSGLVLQ QLTQNRFVEP TTIGTSEWAG LGLLLSVIVL
PTASISTRMV IASLSAFVGT MVFMAILRRI PVRTTLVVPV VGIMLGAVVS ALTTLVAIST
NYLQLLGTWF MGSFTSVVRG QYEMLWVVAV VCGAIFVLAD RLTVAGLGRE VATNLGVRYD
RLILLGTALV AVASGVTTVV VGFLPFLGLV VPNVVSLLRG DDLRSNLPWV CLGGIALVTV
CDIVGRTVRM PFEVPVSMVL GLVGAVAFVA LVLRVQRRG