Gene Sked_04580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04580 
Symbol 
ID8632095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp512933 
End bp513937 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type enterochelin transport system, periplasmic component 
Protein accessionYP_003313256 
Protein GI269793801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.398248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0567003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGC GCCTGCGCGC ACGCACCGCG ACCGCCGTCC TCACGGCGGT CCCGCTCGCC 
CTCGTCCTCG CTGCCTGCGG CGCGGACACC GAGTCGCAGG CCGGTGAGAC GACCGGCGGA
GGTGAACCGC GGACCGTGAC CATCGAGGAC AACCACGGGA GCGTCGAGGT CCCCGTCGAC
CCGGCACGCG TCGTCGCGCT CGACAACCAC GTCTTCGAGA CGCTCTCCGC CTGGGACGTG
CCGCTGGCCG CGGCACCGAA GGGCATCATG GGCGACGGCC TCTGGCCCGA GTACACCGAC
GACGACGCCG TGCTCGACGT CGGCATGCAC CGCGAGCCGA ACCTCGAGTC GATCGTCGCG
GCCGAGCCCG ACCTCATCAT CGGCGGGTAC CGGTTCTCCG ACAGCTATGA CGACATCAAG
GCGCAGAACC CGGACGCGGT GGTCATCGAG ATCGCACCCC GCGAGGGGGA GGACCAGGCC
GCCGAGCTCG CCCGCCAGAC CGAGATCCTC GGCGAGATCT TCGACCGCCA GGACGAGGCC
GCCGCCATCG TCGCGGACTA CGACGCCGCG GTCGACGCCG CGCGCACCGC CTACGACGGG
CAGAGCACGG TTGTCGGGCT CATCACCTCG GGCGGCGAGA TCTCGTACAG CGCGCCCGTG
ACCGGGCGCA GCATCGGCGT GCTGTTCCCC GCGCTCGGCC TTCAGCCCGC CATCGAGCAG
GCCGCCGAGG ACACCTCGCA CGGCGACGAC ATCAGCGTCG AGGCCATCGC GTCGGCGAAC
CCGGACTGGA TCATCGTCCT CGACCGTGAC GGTGCCGGGG TCGGCGAGGG CGAGTACCGC
CCCGCCAAGG AGCTCATCGA GGGTTCTGAG GCGCTCGCGT CGGTCACCGC CGTGGCCGAG
CAGCAGGTCG TCTACCTCGA CCCCGACTTC TACCTCACCG AGGACATCCA GGCGTACACG
GCGCTGTACG AGCAGATCGC GCAGGCCTTC GAGGCCGCGG CCTGA
 
Protein sequence
MSLRLRARTA TAVLTAVPLA LVLAACGADT ESQAGETTGG GEPRTVTIED NHGSVEVPVD 
PARVVALDNH VFETLSAWDV PLAAAPKGIM GDGLWPEYTD DDAVLDVGMH REPNLESIVA
AEPDLIIGGY RFSDSYDDIK AQNPDAVVIE IAPREGEDQA AELARQTEIL GEIFDRQDEA
AAIVADYDAA VDAARTAYDG QSTVVGLITS GGEISYSAPV TGRSIGVLFP ALGLQPAIEQ
AAEDTSHGDD ISVEAIASAN PDWIIVLDRD GAGVGEGEYR PAKELIEGSE ALASVTAVAE
QQVVYLDPDF YLTEDIQAYT ALYEQIAQAF EAAA