| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04520 |
|---|
| Symbol | |
|---|
| ID | 8632089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 506116 |
|---|
| End bp | 507591 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | beta-xylosidase |
|---|
| Protein accession | YP_003313251 |
|---|
| Protein GI | 269793796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.130696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0670778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACGAC CCCTCAGCAC CCGAGCCGCA GCCCTGCTCG CCGCAGCGGC CCTCGCGCTC
GTGACCGCAG CGGCACCCGC ACCCGCTCCC CCGCCCGCTC CCGCCACAGG CGACTCGACG
GCCGTCGCTG CCGTGGCTGC CGCGCCGGCT GGGGACCCCG TCGGCGGCAA GACGCTCGTC
GGCGAGACCT CGCCCATCCA CGACCCCGCC CTCGTGATCG ACGACGACGG CACCTGGTAC
GCGTTCTCGA CCGGGCGGGT CAACCGGGAG AACGGCGGCA CCATCCAGAT CGCCACCTCC
CACGACGACG GCACCACCTG GGAGTACGCG GGCACCGTCT GGGACGAGAT CCCGGCGTGG
ATCGACGACC ACTTCTCCGA CGGGGCGCTG CCCGACAACC TCTGGGCCCC CGAGGTCTAC
GAGCACGACG GCACTTACTA CCTCTACTAC TCGGCGTCGC GGTTCGGCAC CGACGACTCC
CTCACCGCGC TCGCCACCAA CGTGACGCTC GACCCGACCG ACCCCGACTA CGAGTGGGTC
GACCAGGGTC TCGTCGTCGA GTCCCCCGTC TCCGGGCTGC CGGGGGACGC GCGGTTCAAC
GCGATCGACG CCGGGATCGT CGAGGACGAG GACGGCAACC CCTTCATGGC CATCGGCTCG
TTCTGGTACG GGATCTTCCT GGTGCCGCTC GAGTGGCCGA GCGGTAAGCC CGTCGACGGC
TGGCAGGAGC AGACCGTCAA CATCGCCGAC AGGTTCGTCG CCGGCAACCC GATCGAGGCC
CCGTACATCA CGCACCGCGA CGGCTACTAC TACCTCTTCG TGTCCTTCGG GGCGTGCTGC
CAGGGCGCCG ACTCCACCTA CCAGGTGGCC GTCGGGCGCT CAGAGTCCGT GACCGGCCCG
TACCTCGACC GCGAGGGTCA GGACATGTAC GGCGGCGGCG GGACGATCCT GCTCGAGGAG
CACGGTGCCG TGGTGGGTCC GGGCGGGCAG TCGGTGTCCG GCGACTACCT GGCCTTCCAC
TACTACGACG CCTCCAACGA GGAGATCCCG TACTTCCCGA CGCTCGGGAT CCAGCGCCTC
GACTGGGTCG ACGGGTGGCC CGTGGCCGAC CAGCGCGTCG AGCTGCCGAC GGTCGCCGCG
GGGCCGGCCG ACGTGACTGT GGCCCCGGGC GCCGCCGCGA CCTTCACGAC CACGGCCACC
GGAATCCCCT CCCCCGTGGT GGAGTGGGAG ACCTCGACCG ACGACGGCGC GACGTGGACC
GACGTCGCCG TCCAGCCGCG GACCGTGCCC GGCGAGGCCT CCGCGAGCGC CGACGGGCCG
TCGGCGGCAG CACAGGGCGT CGCCTCGTCG ACCCTGAGCC TCGCCGAGGT CACCGCGGAG
CAGGACGGCA CCCTCGTCCG CGCCCGGGTG ACGAACGCCC ACGGGGCCAC GGTCACCGAG
ACCGCAACGC TCACGGTCGT CGCACCCGAG CCCTGA
|
|---|
| Protein sequence | MERPLSTRAA ALLAAAALAL VTAAAPAPAP PPAPATGDST AVAAVAAAPA GDPVGGKTLV
GETSPIHDPA LVIDDDGTWY AFSTGRVNRE NGGTIQIATS HDDGTTWEYA GTVWDEIPAW
IDDHFSDGAL PDNLWAPEVY EHDGTYYLYY SASRFGTDDS LTALATNVTL DPTDPDYEWV
DQGLVVESPV SGLPGDARFN AIDAGIVEDE DGNPFMAIGS FWYGIFLVPL EWPSGKPVDG
WQEQTVNIAD RFVAGNPIEA PYITHRDGYY YLFVSFGACC QGADSTYQVA VGRSESVTGP
YLDREGQDMY GGGGTILLEE HGAVVGPGGQ SVSGDYLAFH YYDASNEEIP YFPTLGIQRL
DWVDGWPVAD QRVELPTVAA GPADVTVAPG AAATFTTTAT GIPSPVVEWE TSTDDGATWT
DVAVQPRTVP GEASASADGP SAAAQGVASS TLSLAEVTAE QDGTLVRARV TNAHGATVTE
TATLTVVAPE P
|
|---|
| |