| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04460 |
|---|
| Symbol | |
|---|
| ID | 8632083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 501142 |
|---|
| End bp | 501792 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | uncharacterized membrane protein |
|---|
| Protein accession | YP_003313245 |
|---|
| Protein GI | 269793790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.155058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTGG GGGTCGGGGT GGTCGCCGGT CTCACGCTCC TCGCGGTCGC CGGGCCGGTG
GTGTTCGTCC AGGCGCGGGC CGCCGACCAC ATGTACACGG CGGACGACGT CCCCGCGACG
CCCGTCGCGC TCGTGCTCGG CGCGCGGGTC TACGACGACG GGACACCCTC GCAGTTCTTG
CGGGCACGAC TCGACCTCGC CGTCGAGCTG TACGGCGCCG GGTCGGTCGA GGTCCTGCTG
GTGCCCGGGG ACGGGCGGCC GGACCACAAC GACGAGCCGG CGGCGATGCG CCGGTACCTC
GTCGAGCAGG GCGTGCCTGC CGAGGCGATC ATCCAGGACT CGGCGGGCTT CGACACCTAC
GACTCGTGCG TCCGGGCGGA CAAGGTCTAC GGCGTCGGTG CGCTCACCGT CGTCACGCAG
AGCTTCCACC TCGCCCGCGC GGTGACGACC TGCCGCGCTG TGGGGGTCGA CGCGGTCGGC
GTCGGCGACA CGACCGTCAA GTCACGCCGC GCCACCTGGG CGAAGACCAC CCTGCGCGAC
CAGCTCGCCG CCATGAAGAC CGTCGTCGAC CTCGTGACGA AGCGTGAGCC GCTCCTCGGC
CCGCCCGACG ACGCCGTCCA GACGGCGTTG GCGACGGCCC AGACACACTG A
|
|---|
| Protein sequence | MRVGVGVVAG LTLLAVAGPV VFVQARAADH MYTADDVPAT PVALVLGARV YDDGTPSQFL
RARLDLAVEL YGAGSVEVLL VPGDGRPDHN DEPAAMRRYL VEQGVPAEAI IQDSAGFDTY
DSCVRADKVY GVGALTVVTQ SFHLARAVTT CRAVGVDAVG VGDTTVKSRR ATWAKTTLRD
QLAAMKTVVD LVTKREPLLG PPDDAVQTAL ATAQTH
|
|---|
| |