Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_04160 |
Symbol | |
ID | 8632053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 463969 |
End bp | 465072 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter periplasmic binding protein, thiB subfamily |
Protein accession | YP_003313216 |
Protein GI | 269793761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.207921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCACCAGCAC CGTCAGGGCT AGCGGCCGAC CGGCCCGCCT CACGACCGCG GCGGTCGCCG GGGCGCTGAG CCTCGCCCTC GCCGCCTGCT CGAGCAGCAC CGACGCCGGC TCCGACGGGT CGGGCGACAG CGCCGGCAGC CCGACCACCG TCGACGTCGT CGTCCACGAC TCCTTCGGGA TCACCGACGA GGCCAAGGCG GCCTTCGAGG AGGAGAGCGG CTTCACCCTC AACGTCATCA CCACCGGCGA CGGCGGTGCC CTCGCCAACA AGCTGGTCCT CACCAAGGAG TCCCCGCTGG GCGACGTGGC CTTCGGCATC GACAACTCCT TCGCGTCACG CGCCGTCGAC GAGGGCGTCT TCGAGCCTTA CACCTCGCCC GCCCTGCCAG ACGGTGCCGG CGACCTCGCC GTCGACGACA CCGGCACGCT CACCCCGGTC GACTACGGCG ACGTGTGCCT CAACGTCGAC ACCGGCTGGT TCGACGAGGC CGGCATCGAC GCCCCCGAGA CCCTCGAGGA CCTCGCCGAC CCGCAGTACG CGGACCTCAC CGTCGTCACC AACCCGGCCA CCTCGACGCC CGGCCTGTCG TTCCTCTTCG CGACCATCGG CCACTTCGGC ACCGACGGGT ACCTCGACTA CTGGTCGAGC CTGACCGACA ACGGCCTCAA GGTCGTCGAC GGCTGGGAGG ACGCCTACTA CACCGACTTC TCGGCGAGCG GCGAGGGCGA CCGCCCGGTC GTGCTGTCCT ACGCGTCGTC CCCCGCCTAC ACCGTGAGCG ACGACGGCAC CTCGAGCACC ACCGCGGCGC TCCTCGACAC CTGCTTCCGC CAGGTGGAGT ACGCCGGCGT CCTCGCGAAC GGCGACAACC CCGAGGGCGC GCAGGCCTTC GTGGACTTCC TGCTGGGCGA CCAGTTCCAG TCGGACATCC CCGAGACCAT GTACGTGTTC CCGGTGAGCC CCGACGCGAC CATCCCCGCC GAGTGGGAGA CCTTCGCCCC CGTCCCCACG TCGCCGATCG CCCTCGACCC GGCCGAGATC TCCGCGAACC GCGACACGTG GATCAAGGAC TGGACCGCTC AGGTGGTCGG CTGA
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Protein sequence | MSTTTSTVRA SGRPARLTTA AVAGALSLAL AACSSSTDAG SDGSGDSAGS PTTVDVVVHD SFGITDEAKA AFEEESGFTL NVITTGDGGA LANKLVLTKE SPLGDVAFGI DNSFASRAVD EGVFEPYTSP ALPDGAGDLA VDDTGTLTPV DYGDVCLNVD TGWFDEAGID APETLEDLAD PQYADLTVVT NPATSTPGLS FLFATIGHFG TDGYLDYWSS LTDNGLKVVD GWEDAYYTDF SASGEGDRPV VLSYASSPAY TVSDDGTSST TAALLDTCFR QVEYAGVLAN GDNPEGAQAF VDFLLGDQFQ SDIPETMYVF PVSPDATIPA EWETFAPVPT SPIALDPAEI SANRDTWIKD WTAQVVG
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