Gene Sked_04160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04160 
Symbol 
ID8632053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp463969 
End bp465072 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter periplasmic binding protein, thiB subfamily 
Protein accessionYP_003313216 
Protein GI269793761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.207921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCACCAGCAC CGTCAGGGCT AGCGGCCGAC CGGCCCGCCT CACGACCGCG 
GCGGTCGCCG GGGCGCTGAG CCTCGCCCTC GCCGCCTGCT CGAGCAGCAC CGACGCCGGC
TCCGACGGGT CGGGCGACAG CGCCGGCAGC CCGACCACCG TCGACGTCGT CGTCCACGAC
TCCTTCGGGA TCACCGACGA GGCCAAGGCG GCCTTCGAGG AGGAGAGCGG CTTCACCCTC
AACGTCATCA CCACCGGCGA CGGCGGTGCC CTCGCCAACA AGCTGGTCCT CACCAAGGAG
TCCCCGCTGG GCGACGTGGC CTTCGGCATC GACAACTCCT TCGCGTCACG CGCCGTCGAC
GAGGGCGTCT TCGAGCCTTA CACCTCGCCC GCCCTGCCAG ACGGTGCCGG CGACCTCGCC
GTCGACGACA CCGGCACGCT CACCCCGGTC GACTACGGCG ACGTGTGCCT CAACGTCGAC
ACCGGCTGGT TCGACGAGGC CGGCATCGAC GCCCCCGAGA CCCTCGAGGA CCTCGCCGAC
CCGCAGTACG CGGACCTCAC CGTCGTCACC AACCCGGCCA CCTCGACGCC CGGCCTGTCG
TTCCTCTTCG CGACCATCGG CCACTTCGGC ACCGACGGGT ACCTCGACTA CTGGTCGAGC
CTGACCGACA ACGGCCTCAA GGTCGTCGAC GGCTGGGAGG ACGCCTACTA CACCGACTTC
TCGGCGAGCG GCGAGGGCGA CCGCCCGGTC GTGCTGTCCT ACGCGTCGTC CCCCGCCTAC
ACCGTGAGCG ACGACGGCAC CTCGAGCACC ACCGCGGCGC TCCTCGACAC CTGCTTCCGC
CAGGTGGAGT ACGCCGGCGT CCTCGCGAAC GGCGACAACC CCGAGGGCGC GCAGGCCTTC
GTGGACTTCC TGCTGGGCGA CCAGTTCCAG TCGGACATCC CCGAGACCAT GTACGTGTTC
CCGGTGAGCC CCGACGCGAC CATCCCCGCC GAGTGGGAGA CCTTCGCCCC CGTCCCCACG
TCGCCGATCG CCCTCGACCC GGCCGAGATC TCCGCGAACC GCGACACGTG GATCAAGGAC
TGGACCGCTC AGGTGGTCGG CTGA
 
Protein sequence
MSTTTSTVRA SGRPARLTTA AVAGALSLAL AACSSSTDAG SDGSGDSAGS PTTVDVVVHD 
SFGITDEAKA AFEEESGFTL NVITTGDGGA LANKLVLTKE SPLGDVAFGI DNSFASRAVD
EGVFEPYTSP ALPDGAGDLA VDDTGTLTPV DYGDVCLNVD TGWFDEAGID APETLEDLAD
PQYADLTVVT NPATSTPGLS FLFATIGHFG TDGYLDYWSS LTDNGLKVVD GWEDAYYTDF
SASGEGDRPV VLSYASSPAY TVSDDGTSST TAALLDTCFR QVEYAGVLAN GDNPEGAQAF
VDFLLGDQFQ SDIPETMYVF PVSPDATIPA EWETFAPVPT SPIALDPAEI SANRDTWIKD
WTAQVVG