Gene Sked_03780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03780 
Symbol 
ID8632016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp422568 
End bp423293 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content75% 
IMG OID 
ProductProtein of unknown function (DUF2510) 
Protein accessionYP_003313179 
Protein GI269793724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.919514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.236518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCC CCGCCGGCTG GTACGACGAC CCGATGGACC AGCAGCTGAT CCGGTACTTC 
GACGGCACGC GCTGGACCGA GCACACCGGC CCCCGCCCCG GCGCGGGTGC GCAGACGTCC
TCGCAGCAGC CGCAGGCCGG AGGCTCGGGA GCGCAGCCGC AGGGCTCCGC CGGGTGGGGC
GCAGGTCAGT CGTCCTGGCA GTCCGCCGCC CCCGGCTCGC GCCCCGACGC CCAGCAGCAG
CCGCAGTCAC CGACGGCGGG GTTCCAGTTC GGCGGTGCAC AGCGCTACCC GACCGCCGAC
GCGACGCCGT CGCCCGGCAC CCCCAAGGGC GTCAAGCTCG GGATCCTCGG CGCGTTCCTC
GCCTGCGCGG CGCTGTTCGC CGTCGGCTAC GCCATGACGG ACCGCGACAG CGACCAGGGT
GAGCCGCTGA CCGCGAGCGA GCTCGGGGTG GTGGGCCTCG GGTGCACCGA GCTCGCCGAC
CAGTACGTGT CGCTCTCGGC CGGCGACCCC GACGCGAATC GCCTCGTCTC GGCGACCGGC
GGTGTCGAGG ACGTCAACGA GGTCGGCACG GTCCGTGCGC CGTCGGGCTC GGGCCAGAAC
CTCGTCCTCG GCTGCTCGTA CCCGACCGCG GAGTGGGGCG ACGGCTCGCA GACCCCGCTC
CTGCTCGACG TCCTCGTCGA CAAGGACCTC GGCCTCTACC TCGAGGCCAC CGCCTCCGAG
CGCTGA
 
Protein sequence
MGAPAGWYDD PMDQQLIRYF DGTRWTEHTG PRPGAGAQTS SQQPQAGGSG AQPQGSAGWG 
AGQSSWQSAA PGSRPDAQQQ PQSPTAGFQF GGAQRYPTAD ATPSPGTPKG VKLGILGAFL
ACAALFAVGY AMTDRDSDQG EPLTASELGV VGLGCTELAD QYVSLSAGDP DANRLVSATG
GVEDVNEVGT VRAPSGSGQN LVLGCSYPTA EWGDGSQTPL LLDVLVDKDL GLYLEATASE
R