Gene Sked_03760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03760 
Symbol 
ID8632014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp420800 
End bp421405 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003313177 
Protein GI269793722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.599281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.484799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCG TCCCCGCCGC CCCTGAGCTC ACCCCGGCCG CCCGACGCGT GCTCGACGCC 
GCGTCCGACC TGTTCTACGA GCGCGGCATC CACGCCGTCG GGGTCGACCT CGTGGCCGAG
ACCGCGGGCG TCACCAAGAA GACGCTCTAC GCACGGTTCG GCTCGAAGGA CGCGCTCGTG
GTCGCCTACC TGCAGGGGCG CGACCGGCGG TGGCGCGAGT TCCTCGAGGT CTTCGTGGCG
GCGTCGGACC AGGCGGCGTC AGACCGGGCC GGGACCGACG GTCCGCTCGT GGTCTTCGAC
GCGGCTGCGG CGTGGTCCGA CGAGCACAGC CCGCGCGGGT GCAGCGCGAT CAACGCGCGC
GCGGAGACGG CCGACCTGGC GGCGCCGGTC TCCCGCGAGG TCACCCGGCA GAAGGTGTGG
CTGCTCGGCG TCTTAGCCGA CCTGTGCCGG GACGCCGGGG TCGCGGACCC CGAGGGGGTC
GCGCGGATGC TCATGCTGTT CTACGAGGGC GCGATCGTCA CCGTCGGCAC GGCGGCCTTC
GGCGAGCCCT TCGTGGTCGC CCGCGAGGCC GCGCGGCAGG TGCTCGCGCA GGCCCCGCGG
GCCTGA
 
Protein sequence
METVPAAPEL TPAARRVLDA ASDLFYERGI HAVGVDLVAE TAGVTKKTLY ARFGSKDALV 
VAYLQGRDRR WREFLEVFVA ASDQAASDRA GTDGPLVVFD AAAAWSDEHS PRGCSAINAR
AETADLAAPV SREVTRQKVW LLGVLADLCR DAGVADPEGV ARMLMLFYEG AIVTVGTAAF
GEPFVVAREA ARQVLAQAPR A