| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_03670 |
|---|
| Symbol | |
|---|
| ID | 8632005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 407225 |
|---|
| End bp | 408031 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003313168 |
|---|
| Protein GI | 269793713 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.99262 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCCA CCCCGACGCC TGACCAGACG ACGTCGAGCC TGCGCAGCCC CCGCGATCCC
GTCCCGCCGC AGCAGCGTGG TCTGCTCACC GAGCAGATCG CCCGCAGGCT CGAGCACGAC
ATCCGCTCCG GGGACATCGC CGTGGGGGCC AAGCTGCCGT CGGAGCGGGA GCTCGCCATC
CAGTTCGGGG CCAGCCGCAA CGTGGTCCGC GAGGTGCTGC GGCGGCTCGA GGCGCAGAGC
CTCATCGAGG TCGCCCCTGG TCGTGGGTCC TTCGTCAGCG AGCACTCCTC CGCACAGGCC
CGCGGGTACG ACGCCCTCTA CCGTGCCGAG CGGCCCACCG CCCGGCACCT CATCGAGGCG
CGCATCCCGC TCGAGGTCGA GATCATCGGC CTCGCGACCG AGCGTGCCAC CGAGGCCGAC
ATCGCCGCCA TGACCGTCGC CAACGACATC CTGCTCACCG CGCAGGACGT CGTCACGCAG
GCCAGGGCTG ACCTCGACTT CCACGACGCC ATCGCCGCGG CGTCGGGGAA CCCGGTGCTG
CGCATCATGC TGTCGTCCAT CAGCGGCATG ATGTTCGAGA TGATGCTGCG GTCCAACTCC
GACCCGTCCA TCGGCGAGCC CGGCGTCCCG CACCACCCCG AGATCCTCGA GGCCGTCAAG
GCCCGCGACG TCGACCTCGC CCGCCACCGC ATGCGCGAGC ACCTGTCCCT CGGCCTGCGG
ACCTACGGCG CCGACCTCGA CGTGTCCCTC GACGTCATGG CCACCCGGCA CATCGAGACG
TTGCTCCGGG GGCAGCAGGG CGGGTGA
|
|---|
| Protein sequence | MPPTPTPDQT TSSLRSPRDP VPPQQRGLLT EQIARRLEHD IRSGDIAVGA KLPSERELAI
QFGASRNVVR EVLRRLEAQS LIEVAPGRGS FVSEHSSAQA RGYDALYRAE RPTARHLIEA
RIPLEVEIIG LATERATEAD IAAMTVANDI LLTAQDVVTQ ARADLDFHDA IAAASGNPVL
RIMLSSISGM MFEMMLRSNS DPSIGEPGVP HHPEILEAVK ARDVDLARHR MREHLSLGLR
TYGADLDVSL DVMATRHIET LLRGQQGG
|
|---|
| |