Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_03630 |
Symbol | |
ID | 8632001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 403989 |
End bp | 405272 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | HipA domain-containing protein |
Protein accession | YP_003313164 |
Protein GI | 269793709 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.524354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCCTA GCAGCCCTCA CCTCGCCGTG CTGCTCGACG GCGAGGTGGT CGCCGAGGTC GGACGCGGTC GGAGCGGCAC CCTCAGGCTC GAGTTCACCG AGAGTGCGCG CGGGCCAGGT CGCACTCCCC TGTCCTTGTC CCTGCCGACG TCGACCGGGA CGATCACCGG CGCCCCGGTC GACACCTTCC TCTCCGGGCT GGTCCCCGAC GACGACGTCG CCCGTCGTGC CGTCGCGCGC GTCCACGGCG CAGACGCGAA CGACGTCCTG AGCCTCCTGG CCGCCGTCGG CAAGGACTGC CCGGGAGCGG TCCAGCTCTG CCCACCGGAC GAGGTCGACG TCACCGCAGC GCGCACAGGG CGGCTCGTCC CGGTCTCGGA CTCCGACGTG GAGATGCGCC TCGCGACGCT CCGGACCGAC AGGGACGCGA GCTGGACGAT GCCTGGCGAG CACTGGTCTC TCGGCGGGAG CCAGCAGAAG TTCGCGCTCC GACGACACGA CGACCGATGG TTCGAGGCGA CCGGGTCCGA GCCCACGAGC CACATCGTGA AGCCCGGGAT CTACGCCCTC CGCGCCCAGG CGATGATCGA GCACGTGAGC ATGCGGGCCG CTGTCCGCTG CGGAGTGCCC GCAGCGGAGA CGGAGTACGC CTCGTTCAAG AGCGAGGACG CGATCGTCAT CACGCGCTTC GACCGAGCCT CGACCGGAGA GCCCGGTGGT CTGCGCCGTC TGCACCAGGA AGACCTCTGC CAGGCGCTCG GGGTCCGTGA GAAGTACGAG AGCGAGGGCG GCCCGGACGC GCGCGCGGTC GTCCGGCTCT TGCGAGAGAG CTCGTCCACC GCGCGAGCCG CTGCTACGAA CGTCGCCCGG TTCCTCGACG GGCTGGTCTA CAACGCCGTC ATCGCTGCGC CGGACGCGCA CGCGCGCAAC TACGCCGTGC TGCTGCAGGG CGACGATGTG GAGCTGGCGC CGTTGTTCGA CGTCGCGACC GGGCTCGCGT ACGACCCTCC GGCGGGCGGT TCGAGAGCAC TCTCGATGAG CATCGCGGGG CAGCTCGACC CGGCCCGCGT CACGCCCGAC ACCTGGAAGA GATTCTGCGA GACGGTGTCC GTGGACGAGA CACCTGTCCT CGAGAAGATC CGGGAGGTTG CCGAGGTCGC TCCCGACGCG ATGGCCGAGG CTCTCGCGGG GATCGACGAC TGGGACGGCG CGGCGTCCGA CGTGTCCGCC CGGCTCTTGC CCGCCGTCCG CGAGCAGGCC CACACCGTCC TCCGCGCCCT GTAG
|
Protein sequence | MPPSSPHLAV LLDGEVVAEV GRGRSGTLRL EFTESARGPG RTPLSLSLPT STGTITGAPV DTFLSGLVPD DDVARRAVAR VHGADANDVL SLLAAVGKDC PGAVQLCPPD EVDVTAARTG RLVPVSDSDV EMRLATLRTD RDASWTMPGE HWSLGGSQQK FALRRHDDRW FEATGSEPTS HIVKPGIYAL RAQAMIEHVS MRAAVRCGVP AAETEYASFK SEDAIVITRF DRASTGEPGG LRRLHQEDLC QALGVREKYE SEGGPDARAV VRLLRESSST ARAAATNVAR FLDGLVYNAV IAAPDAHARN YAVLLQGDDV ELAPLFDVAT GLAYDPPAGG SRALSMSIAG QLDPARVTPD TWKRFCETVS VDETPVLEKI REVAEVAPDA MAEALAGIDD WDGAASDVSA RLLPAVREQA HTVLRAL
|
| |