Gene Sked_03560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03560 
Symbol 
ID8631994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp393803 
End bp395698 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content72% 
IMG OID 
ProductAlkaline phosphatase 
Protein accessionYP_003313157 
Protein GI269793702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAC GCGTTCCCTC CGCCTGGCTG AAGGTCGCCG GCACCGGCGC CCTCGCCGGA 
TCCCTCGCGC TCGGGGCATC GACGCCCGCG CTCGCCACCG ACACCGACCC CGCCGGCCCC
AAGAACATCA TCGTGCTGAT CGGCGACGGC ATGGGCTACA ACCACGTCGA CGCCGCGAGC
CTGTACCAGC ACGGCACCAC GAACCACCAG GTCGCCGTCG ACCCCGCCGC CGGGACCATC
GAGCACGTGC CGGGCACCGC GTCCCAGGTG TTCGAGTCCT TCCCCGTGCA GGTCGGCATG
TCGACCCACT CCGCCAACGG CCGTGCCGAG TACGACCCCG CGAAGGCGTG GGCGGACTTC
ACGTGGATCG CCACGGGCGC CACCGACTCG GCCGCCGCGG GCACCGCGCT CGCCACGGGC
GTCAAGACGA ACAACGGGAT CCTCGGCGTC GACCCCGAGG GCAACAGCGT GAAGAACGTC
GCCGAGCGCG CCGCCGAGCT CGACAAGGCG ACCGGCGTCG TCACGTCGGT CCAGTTCAGC
CACGCGACGC CCGCGGCCTG GGGCGCGCAC AACGCGAGCC GCAACGACCT GCACGGCATC
TCCGAGGAGA TGATCTCCGG CCCGCTCGAC GTGATCGTCG GCGCCGGCCA CCCGCTCTTC
GACGACGGCC ACCAGCCGCT CGCCACGCCC CGCTTCGACT ACCTCAGCGA GCAGGGCTGG
AACTCCCTCA AGGACGGCCA GACCGACTTC ACGCTCGTCG AGGACACCGC CGACTTCGAG
GCGCTCGCCG CGGGCGAGAA CGTCCCGGAC AAGCTGTTCG GCCTCGTCCA GGTGGGCTCG
ACCCTCCAGC AGGCGCGCCC GGGCGACTCG CTCGGCACCC TGCCCTTCGA GGTCCCGCAG
AACGACGTCC CCAGCCTCGC GACCCTCACC TCGGGTGCGC TCAACGTCCT CGAGCAGGAC
GAAGAAGGCC TGTTCCTCAT GGTCGAGGGC GGCGCGATCG ACTGGACCGG CCACGCCAAC
GAGACCACCC GCAACATCGA GGAGACCGTC GACTTCAACG CGGCCGTCGA GACGGTCGTC
GAGTGGGTCG AGACCGAGTC GAGCTGGGAC GAGACCCTCG TCATCGTCAC CGCCGACCAC
GAGACCGGCT ACCTCGACGG CTCCGCCTCC GACCCGACGT GGACGCCGAT CACCGGTGAG
CAGGGCCAGC TGCCCGACCA GAAGTGGTTC TCGGGCAACC ACACCAACCA GCTCGTCCCG
GTCTTCGCCA AGGGCGCCGG CTCGGACCTG CTCGCGTCGT ACGCGGTCGG CACGGACCCG
GTCCGCGGCG CCTACCTCGA CAACGTCGAC ATCGCCCGGG TGGCCTTCGA GTCCTGGGGC
TTCGAGGACG CACCCGAGGA GTCGGGCATC CCGATCGAGG CGACCGTCCC GGAGATCGGC
GAGGCCGAGG GCAGCCTGAC CCTCACCGTC GCCGACGGCG TCGTGGCCCT CGACGGCGGG
AAGAACATCG GTGACCGGTT GCGGTTCCTC GGCCAGCTCC CGACCGTCTC GGTGACGGAC
TCGCGGGCCA GCTCGGCTGT GGGCACCGGT GGCTGGACCG TGTCCGGCCA GGCGACCGAC
CTGTCGTCGG GCCCGCGCAC CATCCGCGCC GCGCACCTCG GCTGGACGCC CAGCACCGCG
GCGGCCAAGC CCGGGCTGTC CCTCGGCTCC CCCGTGCGCA CCGTGCTCGG CGGCGGCGAG
GGCCTCGGCT CCCCCGCGAC CCTCGCGACC GCGAGCAGCG AGGGCCGTCT CGGCACCACC
GACCTCGGCG CCGAGATCGG CCTCGAGGTC CCCGTCGACA CGCGTGCCGG CGACTACACG
GGCTCGATGA GCGTCTCGCT CTTCCCGGTC GACTGA
 
Protein sequence
MTSRVPSAWL KVAGTGALAG SLALGASTPA LATDTDPAGP KNIIVLIGDG MGYNHVDAAS 
LYQHGTTNHQ VAVDPAAGTI EHVPGTASQV FESFPVQVGM STHSANGRAE YDPAKAWADF
TWIATGATDS AAAGTALATG VKTNNGILGV DPEGNSVKNV AERAAELDKA TGVVTSVQFS
HATPAAWGAH NASRNDLHGI SEEMISGPLD VIVGAGHPLF DDGHQPLATP RFDYLSEQGW
NSLKDGQTDF TLVEDTADFE ALAAGENVPD KLFGLVQVGS TLQQARPGDS LGTLPFEVPQ
NDVPSLATLT SGALNVLEQD EEGLFLMVEG GAIDWTGHAN ETTRNIEETV DFNAAVETVV
EWVETESSWD ETLVIVTADH ETGYLDGSAS DPTWTPITGE QGQLPDQKWF SGNHTNQLVP
VFAKGAGSDL LASYAVGTDP VRGAYLDNVD IARVAFESWG FEDAPEESGI PIEATVPEIG
EAEGSLTLTV ADGVVALDGG KNIGDRLRFL GQLPTVSVTD SRASSAVGTG GWTVSGQATD
LSSGPRTIRA AHLGWTPSTA AAKPGLSLGS PVRTVLGGGE GLGSPATLAT ASSEGRLGTT
DLGAEIGLEV PVDTRAGDYT GSMSVSLFPV D