Gene Sked_03500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03500 
Symbol 
ID8631988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp387672 
End bp388430 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003313151 
Protein GI269793696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGG TAGAGGCGCT GACCAAGCGC TACGGGACGA CCACGGCGGT CGACGGGCTG 
AGCTTCACGG CCAGCCCCGG GACCGTCACC GGGTTCCTCG GCCCCAACGG CGCCGGGAAG
TCCACGACCA TGCGGATGAT CGTCGGGCTC GAGCGCCCCA CCTCGGGGAC CGCGACCGTC
GACGGCCGCC GCTACGCGGA CCTGCCGGCG CCGCTGCACT CCGTCGGCGT CATGCTCGAC
GCCCGGTCGG TGCACCCCGG CCGCACGGCG TACCGACACC TGCTGGCCCA CGCCCGCACC
CACGGCATCG GCAAGGCCCG AGTCCGGGAG GTCATCGAGA TGACCGGCCT GGAGTCCGTC
GCCCGCCGCC GCGCCGGGAC CTTCTCCCTC GGGATGGGGC AGCGCCTCGG GATCGCGACG
GCCCTGCTGG GCGACCCGCA GACGCTCATC CTCGACGAGC CCGTCAACGG CCTCGACCCC
GACGGCGTCC TCTGGGTCCG CCGCCTCGTC CGTGACCTCG CCGCGGAGGG GCGCACCGTC
CTGCTGTCCT CCCACCTCAT GCACGAGCTC GCGCTGTGCG CGGACCGGGT GGTCATCATC
GGCAAGGGGC GCCTGCTCGC CGACGCCCCG GTCCAGGAGA TCGTCGACCG CTCGGCGGGC
GGCTCCCTCG AGGAGGCGTA CCTCGAGCTC ACCTCCGGGT CGGTCGAGTA CCGCGGCCGC
GCCGCCGGCG AGACCTCGAC GTCGGGAGGT GCACGATGA
 
Protein sequence
MIQVEALTKR YGTTTAVDGL SFTASPGTVT GFLGPNGAGK STTMRMIVGL ERPTSGTATV 
DGRRYADLPA PLHSVGVMLD ARSVHPGRTA YRHLLAHART HGIGKARVRE VIEMTGLESV
ARRRAGTFSL GMGQRLGIAT ALLGDPQTLI LDEPVNGLDP DGVLWVRRLV RDLAAEGRTV
LLSSHLMHEL ALCADRVVII GKGRLLADAP VQEIVDRSAG GSLEEAYLEL TSGSVEYRGR
AAGETSTSGG AR