| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_03470 |
|---|
| Symbol | |
|---|
| ID | 8631985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 385004 |
|---|
| End bp | 385540 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | DNA-binding protein, excisionase family |
|---|
| Protein accession | YP_003313148 |
|---|
| Protein GI | 269793693 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.417608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGAG CTGAGCTCGT AGAGCAGACA TTCCTCCCCA GCCAGGCCGG TGAGCTCGCC
GAGGTTCACA GCTTCCTGGA GGCGCACGAG CGCAAGCACG GCACGGTCCC GCAGCGGTAC
CTTCTCGTCG GCGACGGGGA GGGCGACCAG GTCGAGCTGC CGGAGTCGAT GTACCACCTG
CTGCACCAGG TCGTCGATGC GCTGACAGCC GGCCGGGCAG TCACGATCGC GCCGCGGTCG
ACGACGCTCA CCACACAGCA GGCTGCGGAC CTGCTCGGCG TCTCACGGCC GACCGTGGTC
CGTCTGATCG ACAGCGGAGA GCTCCCTGCG GAGCGCCCTG GGACTCGGCG CCAGCTCCTG
CTCCGCGACG TGCTCGACTA CCGAGAGCGA CGACGCCAGC ACCAGTACGA CGTCCTCGCG
GCCACCTCGA TCGAGATCGA CGACGATGAC CCGGGAGAGG CGCTCGCCCA GCTGCGTGAC
GTCCGCAGCA CCGTGGCGAG ACGCCGTCGC GCAGCCATGA CCGAGTCAGG GCAGTAG
|
|---|
| Protein sequence | MSGAELVEQT FLPSQAGELA EVHSFLEAHE RKHGTVPQRY LLVGDGEGDQ VELPESMYHL
LHQVVDALTA GRAVTIAPRS TTLTTQQAAD LLGVSRPTVV RLIDSGELPA ERPGTRRQLL
LRDVLDYRER RRQHQYDVLA ATSIEIDDDD PGEALAQLRD VRSTVARRRR AAMTESGQ
|
|---|
| |