Gene Sked_03420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03420 
Symbol 
ID8631980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp378514 
End bp379497 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content76% 
IMG OID 
Productphosphoglycerate dehydrogenase-like oxidoreductase 
Protein accessionYP_003313143 
Protein GI269793688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.643908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.6858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC CGGTCGCCGC CTTCGCGGCG CGCGACGCCG CGCTGCTCGA CGACCTCTTC 
GACGCGCAGA CGCTCGCCCG GCTGCGGGCC GCCGTCGACC TGCTCCCCGG CGTCGTCGGG
CCCGGGACCG ACCTCCGCCA GGTCGAGGTG CTCGTCACCG CGTGGGGCGC TCCCCCGCTC
GACGACGACC TGCTGCGGCG CGCCCCGAGG CTGCGGGCCG TCGTGCACAC CGGGGGGACG
GTCAAGCGGC TGGTGACCGA GGCGTCGTGG GCGCGCGGCG TGCGGGTGTC GAGCGCCGCC
GCGGCCAACG CCCAGCCGGT CGCCGAGTAC ACGCTGGCGA TGGTGCTGCT CGCCGGGAAG
CGGGTGCTCC AGTCCGCGCA GCTCTTCCGC CAGGAGCGGT CCTTCGGCTT CACGCTCCCC
GCGCCGCACG GCAACAACGG ACTGGTCGTC GGGCTGGTCG GCGCGTCCAA GATCGGCCGG
CTGGTGATCG AGCTGCTGCG GCCCTTCGAC ATGGAGGTGC TGCTGCACGA CCCCTACGTC
GACGCGGAGG CCGCGCGGGC GCTGGGCGTC ACGGCGGTGC CGCTCGACGC GCTGCTGCGG
CGGTCCGACG TCGTGTCCCT GCACGCCCCG TCGCTCCCGG AGACCTACCG GATGATCGGC
GCACCCGAGC TGGCGCTCAT GCGCGACGGC ACGACGCTGA TCAACACCGC CCGCGGCGCC
CTGGTGCACA CCGACGCCCT GGTCACCGAG GTGCTGTCCG GTCGGCTGCG CGCCGTCCTC
GACGTCACCG ACCCCGAGCC GCTCCCCGCC GACCACCCCT TCTACGAGGC GGACGGCGTC
CTCCTCACCC CGCACGTCGC CGGGTCGCTC GGCACCGAGG TCCGCCGCCT CGGGGCAGCG
GCCGTCGACG AGGTCGAGAG GCTGGCGGCC GGCCTCCCCC TGACCCACGA GGTCCACGCC
ACCGACCTCC CCACCACCGC CTGA
 
Protein sequence
MTRPVAAFAA RDAALLDDLF DAQTLARLRA AVDLLPGVVG PGTDLRQVEV LVTAWGAPPL 
DDDLLRRAPR LRAVVHTGGT VKRLVTEASW ARGVRVSSAA AANAQPVAEY TLAMVLLAGK
RVLQSAQLFR QERSFGFTLP APHGNNGLVV GLVGASKIGR LVIELLRPFD MEVLLHDPYV
DAEAARALGV TAVPLDALLR RSDVVSLHAP SLPETYRMIG APELALMRDG TTLINTARGA
LVHTDALVTE VLSGRLRAVL DVTDPEPLPA DHPFYEADGV LLTPHVAGSL GTEVRRLGAA
AVDEVERLAA GLPLTHEVHA TDLPTTA