Gene Sked_03270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03270 
Symbol 
ID8631965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp361488 
End bp362768 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content65% 
IMG OID 
Productsite-specific recombinase, DNA invertase Pin 
Protein accessionYP_003313128 
Protein GI269793673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.99262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC TCACAGAGCG TCGTTGCGTG CTGTACGCCC GACTCAGTGT CACGAAGGAA 
GAGTCCGTCT CGATCGCGCG TCAGCTCGAT GCTGGACGCA AGTACGCGGC CGCTCGGGGC
TGGTCGGTCC TCGGAGAGTT CGTCGACGAT GGCGTCTCTG CGACCGCCAA CCGACCCGAG
GAGCGCAAGG GGTGGTCCGA TCTCCTGGCA GTCAGCGGGT TCGATGCAGT CGTGATCTGG
AAGGTGGATA GGCTCGCGAG GCGTGTCCTG GACTTCCTGC ATGCTGACGA GGCCCTCCAA
GAGCGTGGTG CCGGCTTGGT CGCGGTCGAG GACCCGATCG ACATGACGAG CCCCCAGGGC
CGGGCCTTCG CCGTCATGCT GGCCGTCTTT GGAGAGATGG AAGCGGAGGC GATCCGTTCA
AGGGTTCGCG CGGCCCGCGC GCAGATCCTC AAGGCCGGGC GCTGGCCCGG CGGCGGGATG
CCGTACGGTT TCGTCTCGGC CCAGAACCCG GACGGCCCAG GACGCATCCT CGTGAAGGAT
CCAGAGCGAA TCCCTTGGCT GACGGAGGCT GTTGCTCGTG CGATCCGGGG AGAACCGGTC
AACGCGATCG CGCGGTGGCT CACTGATGAG AAGGCGCCCA TGCCGATCCG CTCGTCCATC
AGAGTGGCCG ACGGCACTCG GACCTGGAAC CGACAGACCG TAGACGGGTT GTTGAGGAAC
CCAGTGCTCG CAGGCATGAC CCCCTACAAC CCAGGGCGTG GACGCAGCGG TACTCGTGTA
GACCCTTTGG CTGTGATTCG CGACGAGCGC GGTGAGCCTG TCATCAACGA GTCACTTGCC
ATCCTGACGC AGGAGGAGTT CGCGCACCTC CAACGGACGC TCGACCAGCG GGACGTACCC
CAGGCCCGGA AGAAGGATGA ACGTGTCGCC ACGAGTCCGC TGCTCTCCCG CGTGGTCGTC
TGCCACGACT GTGACGTCCA TCTGTGCCGG GGCACTAACC AGAAGAAGCC GGTCCTCTGC
TGCCCCCAGT GCCGTCAGAC GATGGGACGA ACCGCTCTGG ACCCGTATCT GGTGCGCCGA
CTTCTGACGG AGCGCGGGAG CCAGCCTCTG CTCGGCTCGA CGGTCCGAGC GCAGTGGCAT
GCGGCGGGTT CAGACGAGCA CGCTCGTCGA GAGATCCTGT TGAGCCAGGT CGAGAGTCTG
CGGGTCCGGC GTGGTGTGGT GGGGCGCTAC TTCGACAAGG ACCGTGTCCT CCTGCGCTGG
AAGCCGAAAG TCCATGCGTG A
 
Protein sequence
MNTLTERRCV LYARLSVTKE ESVSIARQLD AGRKYAAARG WSVLGEFVDD GVSATANRPE 
ERKGWSDLLA VSGFDAVVIW KVDRLARRVL DFLHADEALQ ERGAGLVAVE DPIDMTSPQG
RAFAVMLAVF GEMEAEAIRS RVRAARAQIL KAGRWPGGGM PYGFVSAQNP DGPGRILVKD
PERIPWLTEA VARAIRGEPV NAIARWLTDE KAPMPIRSSI RVADGTRTWN RQTVDGLLRN
PVLAGMTPYN PGRGRSGTRV DPLAVIRDER GEPVINESLA ILTQEEFAHL QRTLDQRDVP
QARKKDERVA TSPLLSRVVV CHDCDVHLCR GTNQKKPVLC CPQCRQTMGR TALDPYLVRR
LLTERGSQPL LGSTVRAQWH AAGSDEHARR EILLSQVESL RVRRGVVGRY FDKDRVLLRW
KPKVHA