Gene Sked_02540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02540 
Symbol 
ID8631892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp277425 
End bp278264 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID 
Productaldo/keto reductase, diketogulonate reductase 
Protein accessionYP_003313057 
Protein GI269793602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.935575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA TCCCTGACAT CACCCTGAAC AACGGCGTCA CGATCCCGCA GCTCGGCTTC 
GGCACCTTCC AGGTCGCCGA GGACCAGACG CAGCGCATCG TGGAGTCTGC GATCGAGACC
GGCTACCGCC ACATCGACAC CGCCGCCGGC TACTACAACG AGGCGGGCGT CGGCGCCGCC
GTCCGTGCGA GCGGGCTGGC CCGCGAGGAC GTGTTCGTCA CCACCAAGCT CCGCAACGGC
GACCAGGGGT ACGACAACGC GCTCGCGGCC TTCGAGGCGT CGCGCGCCGC GCTCGACATC
GACTACGTCG ACCTCTACCT GGTCCACTGG CCGGTGCCGA GCAAGGGACA GTACGTCGAG
ACGTGGAAGG CCTTCGAGAA GCTCCTCGCC GACGGCGCGG TCCGCGCGAT CGGCGTGTCG
AACTTCCTGC CCGAGCACCT CGAGACGCTC CTCGCCGAGA CCGACGTCGT GCCGGCCGTG
AACCAGATCG AGGTGCACCC GACCTTCCAG CAGCGCAAGC TCGTCGAGGT GTCGCGTGCC
GCTGGCATCG CGATCGAGGC GTACAGCCCG CTCGGCCGCG GCGCCGACCT CGAGTCCGAC
GAGGTCACGT CGATCGCCGC CGCGCACGGG GTCACCCCGG CGCAGGTGGT CATCCGCTGG
CACCTGCAGC AGGACCACAT CGTCATCCCC AAGTCGAACA ACCCCGAGCG CATCGCCGCG
AACCTCGACG TCCTCGGCTT CCAGCTGACC GTCGACGAGA TCGAGCAGAT CAGCTCCCTC
GAGGCCGGCA ACCGCACGGG CGCCGACCCC GCGACGGCAG AGTTCACGCA GTTCCGCTGA
 
Protein sequence
MTQIPDITLN NGVTIPQLGF GTFQVAEDQT QRIVESAIET GYRHIDTAAG YYNEAGVGAA 
VRASGLARED VFVTTKLRNG DQGYDNALAA FEASRAALDI DYVDLYLVHW PVPSKGQYVE
TWKAFEKLLA DGAVRAIGVS NFLPEHLETL LAETDVVPAV NQIEVHPTFQ QRKLVEVSRA
AGIAIEAYSP LGRGADLESD EVTSIAAAHG VTPAQVVIRW HLQQDHIVIP KSNNPERIAA
NLDVLGFQLT VDEIEQISSL EAGNRTGADP ATAEFTQFR