Gene Sked_02160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02160 
Symbol 
ID8631854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp225133 
End bp227610 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content71% 
IMG OID 
Producttrehalose/maltose hydrolase or phosphorylase 
Protein accessionYP_003313020 
Protein GI269793565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACC GCACCACCGA CGAGAAGCAG CACGTCGACC GCAGCCGGTT CCCGGCCGAC 
GAGTGGCGCC TCGTCGAGAA GCGCTTCTCG ACCGAGGACC TCGGCGTCAC CGAGACGCTG
TTCTCGGTCG CCAACGGCTA CCTCGGCCTG CGCGGCAACG TCGAGGAGGG GCGCGAGTCC
CACACGCACG GGACCTTCGT CAACGGCTTC CACGAGACGT GGCCGATCCG GCACGCGGAG
GAGGCCTTCG GTCTCGCGCA GGTCGGCCAG ACGATCGTCA ACGCCCCCGA CGCCAAGGTG
ATCCGCCTCT ACGTGGACGA CGAGCCGCTG CTGCTGCCCG TCGCCGAGCT CGTCGACTAC
GAGCGGTCCC TCGACATGCG CGACGGCGTG CTGCGCCGCG ACATCGTGTG GACCACGCCC
GGCGGCAAGC GGGTGCAGAT CCGCTCGCAG CGCATGGTGT CCTTCGCGGA GCGCCACCTC
GCCGTGATGA CCTTCGAGGT CACGATGCTC GACGAGGCCG CGCCCGTCGC GATCTCCTCG
CAGATCCTCA ACCGGCAGGA CGGCGAGGAC GAGTACCACG TGCGTGCCGC CGCGATGGGT
GAGGGCTTCG ACCCGCGCAA GGCCAACCAG TTCACCGGCC GCGTGCTCCA GCCGCAGACG
CAGTGGGCCG ACGACGAGCG CCTCGTGCTC TCGTACTCGG TGACCAACTC GGGCATGACG
CTCGCCGTCG CCGCCGACCA CCAGATGGTC ACCGACAACC CCGTCGAGCT GCGCACCCTC
GTCGAGGGTG ACGTGGCCAA GCACGTGTTC CGCGTCGACG CGCAGCCCGG CCAGCCGATC
CACCTCACCA AGACCGTGGC GTACCACACG TCCCGCGGCG TCCCCGCGCG CGAGCTCGTC
GACCGGTGCC GCCGCACCCT CGACCGCGCC GGGCGCGACG GGCTCGAGGG CACCTTCCGG
GCCCAGCGCG CCTGGCTCGA CGACTTCTGG GCGCGGTCCG ACGTCGAGAT CCCCGGCCAG
CCGGAGATCC AGCAGGCCGT GCGCTGGAAC CTGTTCCAGC TGGCGCAGGC GAGCGCCCGC
GCCGAGGGCA GCGGGGTCCC CGCCAAGGGA CTCACCGGCT CCGGCTACGG TGGCCACTAC
TTCTGGGACA CCGAGATCTA CGTCCTGCCG TTCCTCACCT ACACGAGCCC CCGGTACGCG
CGGAACGCCC TGCGCTTCCG CTACCAGATG CTCGACGCCG CACGGAAGCG TGCGGGCCAG
GTGTCGCAGC TGGGCGCGCT CTTCCCGTGG CGCACCATCA ACGGCGAGGA GGCCTCGGCG
TACTACGCGG CCGGGACCGC GCAGTACCAC ATCGACGCCG ACATCAGCTA TGCGCTGGTG
CAGTACGTGC TGGCCACCGG GGACCGCGAG TTCTTGGAGC GCGAGGGCGT CGACATCCTC
GTCGAGACCG CGCGCATGTG GGCCGACCTC GGGTTCTGGC GGGTCAACGG CGACGACGAG
TTCCACATCC ACGGCGTCAC CGGCCCGGAC GAGTACACGA CGGTCGTCAA CGACAACCTC
TTCACCAACG TCATGGCGCG CTTCAACCTG CGTGCCGCGG TGCGGGCGCT CGAGATCATC
GGCGAGACCG ACCCGGCCTC GCGCGCCGAC GTGGACGCCC GCCTGGGCAT CACCCACGCC
GAGGTGCACG AGTGGTCCAA GGCCGCCGAG AAGATGTCGA TCCCGTGGGC CGAGCACCTG
GGCATCCACC CGCAGGACTT CCACTTCCTC GAGCGCGAGG TGTGGGACGT CGCGGCGACC
CCGGCGGACC GCCGGCCGCT GCTGCTGCAC TACCACCCGC TCGTGATCTA CCGCTACCAG
GTGCTCAAGC AGGCCGACGT GGTGCTCGCG CTGTTCCTCC AGGGGAACCA GTTCACCGAC
GAGGAGAAGC TCGCGGACTT CGAGTACTAC GACCCGTTGA CCACGGGGGA CTCGACGCTG
TCGGGCGTGG TGCAGTCGAT CGTCGCGGCC GAGGTCGGCT ACCAGGACCT CGCGCTCGAG
TACTTCGAGA AGTCCGTCTA CGTGGACCTC GCGAACCTGC ACGCCAACGC GTCCGACGGC
GTCCACGTGG CGTCGGCGGG CGGCTCGTGG TCGGCTCTCG CCTTCGGCTT CGGCGGCATG
CGGGACCACG ACGGGCACGT CGCCTTCGAC CCGCGCCTGC CGGCGTCGTG GGACTCGCTC
ACCTTCCGGG TGACGGTCAA GGGCTCGCGC CTGCGCGTGC ACCTCACGGC CGGGGCCATC
GAGCTGACCT GCGAGACCGG CGACGGTGCG CACGTCTCGG TCCGCGGCGT CCAGCACGAC
GTGCGCCCAG GCGAGCCGAC GGTCGTCGCC CTCGAGGACC AGGGGCCCGT CCGCTCGGGA
CGGCCCAGCA TGCGCCGGCT CTCGGGCAAC CGCCGCGAGG ACGGCACCCT CATCCAGGCC
ACCGTCCCGC ACTCCTGA
 
Protein sequence
MSHRTTDEKQ HVDRSRFPAD EWRLVEKRFS TEDLGVTETL FSVANGYLGL RGNVEEGRES 
HTHGTFVNGF HETWPIRHAE EAFGLAQVGQ TIVNAPDAKV IRLYVDDEPL LLPVAELVDY
ERSLDMRDGV LRRDIVWTTP GGKRVQIRSQ RMVSFAERHL AVMTFEVTML DEAAPVAISS
QILNRQDGED EYHVRAAAMG EGFDPRKANQ FTGRVLQPQT QWADDERLVL SYSVTNSGMT
LAVAADHQMV TDNPVELRTL VEGDVAKHVF RVDAQPGQPI HLTKTVAYHT SRGVPARELV
DRCRRTLDRA GRDGLEGTFR AQRAWLDDFW ARSDVEIPGQ PEIQQAVRWN LFQLAQASAR
AEGSGVPAKG LTGSGYGGHY FWDTEIYVLP FLTYTSPRYA RNALRFRYQM LDAARKRAGQ
VSQLGALFPW RTINGEEASA YYAAGTAQYH IDADISYALV QYVLATGDRE FLEREGVDIL
VETARMWADL GFWRVNGDDE FHIHGVTGPD EYTTVVNDNL FTNVMARFNL RAAVRALEII
GETDPASRAD VDARLGITHA EVHEWSKAAE KMSIPWAEHL GIHPQDFHFL EREVWDVAAT
PADRRPLLLH YHPLVIYRYQ VLKQADVVLA LFLQGNQFTD EEKLADFEYY DPLTTGDSTL
SGVVQSIVAA EVGYQDLALE YFEKSVYVDL ANLHANASDG VHVASAGGSW SALAFGFGGM
RDHDGHVAFD PRLPASWDSL TFRVTVKGSR LRVHLTAGAI ELTCETGDGA HVSVRGVQHD
VRPGEPTVVA LEDQGPVRSG RPSMRRLSGN RREDGTLIQA TVPHS