Gene Sked_01970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01970 
Symbol 
ID8631835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp207227 
End bp208102 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID 
Productpredicted phosphosugar isomerase 
Protein accessionYP_003313002 
Protein GI269793547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.212959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA CGTACGTGCA CGACGAGATC GCTTCGCAGC CAGAGAACTG GCGACGGGCC 
GCCGGGCTGC TGCCCGAGGT CGCCGACCGC CTCCCGCAGC GCGGTGAGCG CATCGCCGTC
GTCGGCTGCG GCACCAGCTG GTTCGTCGCC CAGGCCTACG CGGTCCTGCG CGAAGAGGCC
GGGCACGGCA CCACCGACGC CTTCGCCGGG TCGGAGTACC CGGTGCTGCG GACCTACGAC
CGCGTGCTCG CGATCTCCCG CTCCGGCACC ACGACCGAGA TCCGTGAGCT CCTCGGACAG
GTCACGCACG TCCCGACCGT GCTCGTGACA GCCGTCGAGG ACTCGCCCTG CGCCGAGGCC
GCCGACGTGA CCGTCGGCCT GGCCTTCGCC GACGAGCAGT CCGTCGTGCA GACCCGCTTC
GCCACGACCG CGCTCGCCCT CCTGCGAGCG CACCTCGGCC AGGACGTCGA GGCCGCAGCG
GTCGACGCCG AGAAGGCCCT CGAGGTCGAC GTCGAGCAGC TCGTCGACCT CGAGCAGGTC
ACCTTCCTCG GGCGCGGCTG GACCGTCGGC CTGGCCAACG AGGCCGCCCT CAAGACGCGC
GAGGCCGGCC AGTTCTGGGC CGAGAGCTAC CCCGCCATGG ACTACCGGCA CGGCCCCATC
GCGATCGCCG AGCCCGGACG CGCCGTCTGG ACCTTCGGCG AGGTGCCGGA GGGGCTGCCC
GACGACATCG CCGCCACCGG CGCGCTCCAC GTGCACCACG ACCTCGACCC GCTGGCCGCG
CTCGTCGTCG CCCAGCGCTT CGCGGTCGCC GTGGCCGAGC ACCGTGGCCT CGACCCCGAC
CGGCCGCGCT CCCTCACGCG CGCCGTGATC CTGTAA
 
Protein sequence
MTATYVHDEI ASQPENWRRA AGLLPEVADR LPQRGERIAV VGCGTSWFVA QAYAVLREEA 
GHGTTDAFAG SEYPVLRTYD RVLAISRSGT TTEIRELLGQ VTHVPTVLVT AVEDSPCAEA
ADVTVGLAFA DEQSVVQTRF ATTALALLRA HLGQDVEAAA VDAEKALEVD VEQLVDLEQV
TFLGRGWTVG LANEAALKTR EAGQFWAESY PAMDYRHGPI AIAEPGRAVW TFGEVPEGLP
DDIAATGALH VHHDLDPLAA LVVAQRFAVA VAEHRGLDPD RPRSLTRAVI L