Gene Sked_01960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01960 
Symbol 
ID8631834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp206249 
End bp207217 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator/sugar kinase 
Protein accessionYP_003313001 
Protein GI269793546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.739718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GAGACGCTCT CCCCAGCCTC GGCGACGGCC TCCCCGTCGT CGCCATCGAC 
GTCGGCGGCA CGACCATGAA GGTCTCCGGC GTCGGCCCGA CGGGCGCCAT GACCGCCCCG
CGCCGTGTCC CCAGCCCGCC GCCGGGCCCC GGCAGCGCCG ACGAGGTCGT GCGCATCGCC
ACCGACCTCG TCCGCGAGGA GTCGGAGCGG CTCGGCGTCA GCCCGGCCGG TCTCGGCATC
GCGCTGCCCG GTGTCGTCGT CGAGGACCAG GCGCTCGGGG TGTACTCCGA GAACCTCGAG
TGGCACGACG TCGACTTCCG GGCGGCCTTC GCCCAGACTC TCGACATCCC GGTCGCCGTC
GCCCACGACG TCCGGGCTGC CGGCGCCGCA GAGACGCGCC TCGGTGCGGC TCAGGGTGCC
TCGACGGCCC TGGTGCTCGC GATCGGCACC GGCATCGCCA CCTCGGTCCA GGTCGACGGC
CGGCTGCACG TCGGCCGCGG CTACGCCGGC GAGATCGGTC ACGCCGTCGT CGAGCCCGGC
GGCGAGCCCT GCGTCTGCGG GAACCGGGGG TGCCTGGAGG CGACGGCCTC GGCCGGTGCC
ATCCGCCGCC GCTACGAGCG TGACGCCGGG ACGCAGGTCG ACGGCGCGAA GGAGGTCCTC
GCGCTCGCCG CAGCCGGCGA CCCCGTCGCG GTCGCCGTGC GCGACTCGGC CTTCGACGCG
CTCGCCCTCG GGCTCTCGCA CGCGGTCACC CTGCTCGTCC CGGACGTGGT GGTCATCGCC
GGCGGTCTCT CGGAGGCCGG CGACGCGCTG CTCGTCCCGC TCGCCGAGCG GCTCGAGCGC
CTGGTGCGGT ACGGACCCGT CCCGCCGCTC GTGCGGGCCC ACCTCGGCGA GGACGCCGGG
CTGGTCGGCG CGGCCCTCGC GGCCCGCGAC GCCCTCGCCC CGACGGGCGC TGCGCAGACC
TCGCGATGA
 
Protein sequence
MTQRDALPSL GDGLPVVAID VGGTTMKVSG VGPTGAMTAP RRVPSPPPGP GSADEVVRIA 
TDLVREESER LGVSPAGLGI ALPGVVVEDQ ALGVYSENLE WHDVDFRAAF AQTLDIPVAV
AHDVRAAGAA ETRLGAAQGA STALVLAIGT GIATSVQVDG RLHVGRGYAG EIGHAVVEPG
GEPCVCGNRG CLEATASAGA IRRRYERDAG TQVDGAKEVL ALAAAGDPVA VAVRDSAFDA
LALGLSHAVT LLVPDVVVIA GGLSEAGDAL LVPLAERLER LVRYGPVPPL VRAHLGEDAG
LVGAALAARD ALAPTGAAQT SR