| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_01800 |
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| Symbol | |
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| ID | 8631818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 187544 |
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| End bp | 191476 |
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| Gene Length | 3933 bp |
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| Protein Length | 1310 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | HAMP domain-containing histidine kinase |
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| Protein accession | YP_003312986 |
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| Protein GI | 269793531 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTCC GAGGGAAGAT CCTCGCCACC CTTGCCGTGC CTGTGATCGT GCTGTTCTTC
GCCGCCGGTC TGTTCTCCGT GGCCGCCTTC GACGACGCGA AGGTCGCCAG CCAGGCGGAG
GACGCGGTCG ACCTCGGTCC CGCGATCGAG GCCGCCAGCG CAGCGCTCTC CGAGGAGCGC
ACCGTGTCGG TCACCACCGC GCGGGGTCAG ACGACGGCCG AGATCGTCGC CGTCCGCAAG
GTCACCGACG AGGCGCTCGC CTCTCTCGCC ACGGCCTTCC GGGCCGTCGA CGTCAGCGCG
ATCGACCCCC GGGTCCGGAC CGCGCTCGAC GGTGCGCTCG CCTCGAACAA CCTCGACCTG
GTGGTCATCC GCGACGAGCA GAAGCGCGGC ACCGTCGGGC CGGACGACCT CTCGACGCGG
TACACCGCGC TCATCAAGCG CCTGCCCGCC GGCCTGTCCG CCCTCTCCGC AGGCCTCACC
GACCGACAGC TCGCCGCGGA CGTCGACGCC TACGTCACCT CGCTCGACGC CCTCGACCAG
CTCGGTGCCG AGCTGCCGCT CATGCAGCAG GCGCTCATCG ACGCCTCGCG CGACAAGCTG
GCCATCAACC GCGTGTACGC GCTCACCACG ATCGTCGCGG ACACCAACGC CGCACGAGCC
CGGGCGACCG AGGCCGTGGC GTTCCTCGAC GACACCGACC TCATCCTCCC TCGCGCCAAC
GTGGAGTACA CCGGTCTGCG CCGTCTGCTC GCGACCGGTG ACTTCTCCTC GGTCCGGCCG
GACCTCGCGG CCCGCTGGCC CGGTGCGGTC GAGACCGAGG TCAACCGCAT CGCGCCGCTC
AACGAGACCT TGAGCGTGCG GATGGCCGAA GCAGCGTCGG ACTCGACGGC CTCCGCCCGC
AGCACCGCGA TCGCGACCGT GATCATCGCG ATGCTCACCG TCCTCGCCTC CGTCGTGGTC
GCGCTGCTCA TCGCCCGACG CATCACCGGG CCGCTCAAGC ACCTCACCAA GACCGCCGGC
GAGGTCCGCG ACCAGCTGCC GCGGCTCGTC GAGCAGACCG CCGTGCCCGG TGCGATGCCG
GACTTCGAGC TCCCCGAGAT CGTCGTCGAG TCCGACGACG AGGTCGGCCA GCTGGCCGCG
GCCTTCAACG ACGTCAACCA CACGACCGTC GAGGTCGCCC GCGAGCAGGC CGCGCTGCGC
GGGTCCATCG CCGAGATGTT CGTCAACGTG GCCCGCCGCG ACCACGTGCT GCTCAACCGC
CAGCTCGCGT TCCTCGACGA CCTCGAGCGG TCCGAGGAAG ACCCGAACAT CCTCGCGAAC
CTGTTCCGGC TCGACCACCT CGCGACCCGG ATGCGCCGCA ACTCCGAGTC GCTCCTGGTG
CTCGCCGGGA TCGACTCGGG CCGCCGCGTG CGCCAGCCGA TGCCCGTATC CGACGTGGTC
CGCACCGCGT CGTCCGAGAT CGAGCTGTAC GACCGCATCC ACCTCAACCT CCAGTCCGAC
CCGCTCATGC TCGGGCACAC GGCGCTCAAC GCGGCGCACC TCGTCGCCGA GCTCCTCGAG
AACGCGACGA TGTTCTCGGA GCCCAACACC GCGGTCGAGG TCACCACGAC CCGCACGAGC
CACTACGTCA CCATCGAGGT GCGCGACCAC GGGCTCGGGA TGAGCGCCGA CGACATCGCG
AGCGCCAACG AGAAGGTCGC CTCGCGCTCG CCCTCCGACG TCATCGGCGT CCAGCGCCTC
GGTCTGTTCG TGGTCGGTCG TCTCGCCGAC AAGCTCGGTG CGCACGTGGT GTTCGGTCTG
CCCGTCGACG GCAGCGCCGG CACCGTGGTG ACGGTGTCGC TGCCGCTCTC CCTGTTCGTG
GACGAGTCCG ACGTCCCGCT CCAGCTGCCG ACCGACCCGC TGGTCCCCGC GACGCAGCAG
GCCACCCAGG ACTGGACGGC ACCCGAGGCC GTGACGGCCG AGCCCGTGGA CCTCGAGGCG
CTGACCGACG GCGCGACGAG CATGGGCATG CCCCGTCGCC GCGCGTCGAT CCCTGCCTCG
GCCGCGCTCC CGGACGCCCC GGTCGCCGCC GCGCCGGCCA ACCTGCCGCC CGCCGACGAC
TCCATCGTGC TCCCGGCGCT CGAGGCCGCC GACCCGGAGG TCGAGCTGAC CGCGGTGACG
GACGTCGACT GGGCGCCCGA GCAGACCCTC GCCGAGGCCC TGCCGCCGAG CTTGCCCAGC
CGTGCCCGTG GGGAGTCTGC CGGTGCCGCC GGCGCTCCGT CCCTCGAGCC CGTCCAGGAC
GCACCGCTGC TCGACGGCGG TCGTCGCAGC GCGATGTTCT CGCGCTTCCG CACCCTCAAC
GCCCTCGAGG ACGGGGCCTC CGCCCTCGAC GCGGTCGCCG CCGAGCGTGG CGCCCCGCTG
GCCGTCCCCG GGCTCGCCGA CGACGAGCAG CCGCAGTCGT GGGCCACCTC CGCCCTCGAG
AGCCTCGGGG TGGCGAAGCC GGCCGAGCCG GAGCTGCCCT CGCGCGGCAC CGTCGTGGTC
CCCTCGCTCG AGCCCGACGA GGAGGAGTGG GCGCCGGCCT CGGCCGACCT CTACCCCGCC
CCCGTCGAGC AGCCCGTCGT CGAGCCGCAG CCCGCGGAGC AGGCGCCTCA GCCGCAGTGG
GCGGCGCCGC AGCTCCAGGA CGACCAGCAG TGGGCCGAGT CCTCTGCGCT GCCCGAGCCC
GCGCCGGCGG CCAGGTTCGC CTCGGCGCCG GAGCCGGTCC GCCCCCAGGC CGTGGACGAC
GACGCGTCGT CGACCTGGGC CCCCGTGACC GCCTACGAGC CCCTGGGCGC CTACGAGGCG
CAGTCCGCGG CAGGTGTGCC CGAGCCCGAG CCGGAGCCCG AGGCGGCCCC GCCGCTCGCG
ACCCGCGGGG CGCGGCGTGC GCTCGCCGAG CCGCAGCCGG TCTTCGAGCC CGAGCCGACG
TTCGCACCGG AGCCGACGTT CGCACCGGAG CAGGCGTTCG CGCCCGAGCC GGCCTTCGTC
CCCGAGGAGT CCTTCGAGCC CGTCGGGTCT CTGTCGGACC GGGTCGACGC CACCGCGCCG
GCTCCGACGC CGGTCGAGAC GGCGCCCGAG CCCGTGGCGG CCCAGCCCGC CGCTCCCGCG
CCCGTGGCTC AGGCCTCGGT CCCGGGTGCC TTCGAGGCGC CGCTGCCGAG CTTCGCCGAC
GTGCTCTCCG ACGCGCCGAC CCGCCGGTCG ACCCGTCAGC GTGAGGCGCC TGTGCGACGC
GGCCTCTTCG GCCGCAAGAA GAAGCGCGAC GACGAGACCG ACGAGGCCCT GCCCGCTGCG
CCGCAGCGCG CCGCAGAGCC CGTGGCGCTG ACCCCGCGCA CCCCCGCGGT CTTCAGCCCG
GGTGCAGGGA GCCCGGCGCC CGCGCCGGTC GCCTTCAGCC CCGAGCCGGT CCTCGCGGTC
CCAGCCGCGA CGGACCAGTC GGCGTGGGCT CCGGCGCCGT CGCGCAACAC GCTGCCAGAC
CTGGCGAGCG GCTCCTGGAA CCCTGCCCCC GTGCCCGACA CCGCGCTCGC CGAGCTCGGC
AAGATCGCGG GCACCACCGA CAGCTGGACG CCCCCGGGGC AGATCAGCTC GGACATGTCC
TCGATGCTCG CCATGCGGTC GAACATCCAG GAGCAGGCGC TGGCCGAGCT GAGCCAGCTG
TCCTCCTACC GCCCTGCGGC GGTCGAAACC TCACAGGGCG GCGGGCTGAC CCGCCGTACC
CGTGGCGAGG TCGCGGAATC CACCGACGAC CTCGCGTCCC AGAAGATCAG CCGCGACGCG
GCCGAGCTTC GCTCCCGGCT CTCGGCGTTC CAGTCGGCCA CCTCGCGTGG ACGTCAGGCA
CCCGAGGGCG AAGGTCACAC CGAGGAGGCC GCGGCACCCG CCGTGGACCT CAGCACGCAG
TACGTCCCAG ACTCGGCGCC CCAGCCGCGT TGA
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| Protein sequence | MSVRGKILAT LAVPVIVLFF AAGLFSVAAF DDAKVASQAE DAVDLGPAIE AASAALSEER
TVSVTTARGQ TTAEIVAVRK VTDEALASLA TAFRAVDVSA IDPRVRTALD GALASNNLDL
VVIRDEQKRG TVGPDDLSTR YTALIKRLPA GLSALSAGLT DRQLAADVDA YVTSLDALDQ
LGAELPLMQQ ALIDASRDKL AINRVYALTT IVADTNAARA RATEAVAFLD DTDLILPRAN
VEYTGLRRLL ATGDFSSVRP DLAARWPGAV ETEVNRIAPL NETLSVRMAE AASDSTASAR
STAIATVIIA MLTVLASVVV ALLIARRITG PLKHLTKTAG EVRDQLPRLV EQTAVPGAMP
DFELPEIVVE SDDEVGQLAA AFNDVNHTTV EVAREQAALR GSIAEMFVNV ARRDHVLLNR
QLAFLDDLER SEEDPNILAN LFRLDHLATR MRRNSESLLV LAGIDSGRRV RQPMPVSDVV
RTASSEIELY DRIHLNLQSD PLMLGHTALN AAHLVAELLE NATMFSEPNT AVEVTTTRTS
HYVTIEVRDH GLGMSADDIA SANEKVASRS PSDVIGVQRL GLFVVGRLAD KLGAHVVFGL
PVDGSAGTVV TVSLPLSLFV DESDVPLQLP TDPLVPATQQ ATQDWTAPEA VTAEPVDLEA
LTDGATSMGM PRRRASIPAS AALPDAPVAA APANLPPADD SIVLPALEAA DPEVELTAVT
DVDWAPEQTL AEALPPSLPS RARGESAGAA GAPSLEPVQD APLLDGGRRS AMFSRFRTLN
ALEDGASALD AVAAERGAPL AVPGLADDEQ PQSWATSALE SLGVAKPAEP ELPSRGTVVV
PSLEPDEEEW APASADLYPA PVEQPVVEPQ PAEQAPQPQW AAPQLQDDQQ WAESSALPEP
APAARFASAP EPVRPQAVDD DASSTWAPVT AYEPLGAYEA QSAAGVPEPE PEPEAAPPLA
TRGARRALAE PQPVFEPEPT FAPEPTFAPE QAFAPEPAFV PEESFEPVGS LSDRVDATAP
APTPVETAPE PVAAQPAAPA PVAQASVPGA FEAPLPSFAD VLSDAPTRRS TRQREAPVRR
GLFGRKKKRD DETDEALPAA PQRAAEPVAL TPRTPAVFSP GAGSPAPAPV AFSPEPVLAV
PAATDQSAWA PAPSRNTLPD LASGSWNPAP VPDTALAELG KIAGTTDSWT PPGQISSDMS
SMLAMRSNIQ EQALAELSQL SSYRPAAVET SQGGGLTRRT RGEVAESTDD LASQKISRDA
AELRSRLSAF QSATSRGRQA PEGEGHTEEA AAPAVDLSTQ YVPDSAPQPR
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