Gene Sked_01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01790 
Symbol 
ID8631817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp186341 
End bp187339 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content76% 
IMG OID 
Productputative NAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_003312985 
Protein GI269793530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGG TCACGATCAC AGCGCCAGGC GGTCCCGAGC AGCTCACCTG GCAGGAGGTC 
CCGACGCCCG TCCCCGCACC CGACGAGGTG CTCGTCCGGG TCGCCGCGGC CGGGGTGAAC
CGTGCCGACC TCATGCAGCG CCAGGGGCAC TACCCGCCGC CGCCGGGCGC GCCGGAGTGG
CCCGGGCTCG AGGTGTCGGG CGTCATCGAG GCCCTCGGGT CCGAGGTCGC CGGGTGGCAG
GTCGGCCAGC GCGTCGCGGC GCTCGTCGAC GGCGGCGGCT ACGCGACCCA CGCGGCCGTG
CCCGCGACCC AGCTCTTCAC GGTGCCCTCC GGCATGGGCC TGGTCGAGGC GGCAGCACTC
CCCGAGGCGG TCTGCACCGT GTGGAGCAAC CTCGTGGGCG CCGCGCACCT CACCGCAGGC
CAGACGGTCC TGGTGCACGG CGGCGCCGGC GGCGTCGGGA CCGTCGCCGT CCAGGTGGCC
GTGGCCCTCG GCGCCCGGGT GCTGGTCACG GCCGGCAGCC AGGAGCGGGT CGACGCGTGC
GTCGCCCTCG GTGCGGCGGC CGGCTTCGTC TACCGGACCA CCGACGGCTC GTCCTTCACC
GAGGCGCTGC CCGGACTCGT CCAGGAGCAG ACCGACGGTC GCGGGGCCGA CGTCATCCTC
GACGTGGTGG GCGCCGCCTA CCTCGACGCG AACCTGCGCT CGCTCGCCAC CGGCGGACGC
CTGGTGGTCA TCGGCATGCA GAAGGGCACC CGCGCCGAGC TCGACCTGGG CCGCCTGCTC
ACCCAGCGTG CCTCCGTGGT CGGCACGACG CTCCGTGCCC GGCCGCGCTC GGAGAAGGCA
GCGATCGTGG CCGCGGTCCG CGAGCACGTG TGGCCGATGC TCGAGGACGG CCGGCTGCGC
CCCGTGGTGC ACGCCGAGGT CCCGATGCGC GACGCGTCGC GCGCACACGA GCTCATGGAC
TCCGGAGCGG TGCTCGGCAA GGTCCTGCTC GTCACCTGA
 
Protein sequence
MHAVTITAPG GPEQLTWQEV PTPVPAPDEV LVRVAAAGVN RADLMQRQGH YPPPPGAPEW 
PGLEVSGVIE ALGSEVAGWQ VGQRVAALVD GGGYATHAAV PATQLFTVPS GMGLVEAAAL
PEAVCTVWSN LVGAAHLTAG QTVLVHGGAG GVGTVAVQVA VALGARVLVT AGSQERVDAC
VALGAAAGFV YRTTDGSSFT EALPGLVQEQ TDGRGADVIL DVVGAAYLDA NLRSLATGGR
LVVIGMQKGT RAELDLGRLL TQRASVVGTT LRARPRSEKA AIVAAVREHV WPMLEDGRLR
PVVHAEVPMR DASRAHELMD SGAVLGKVLL VT