| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_01650 |
|---|
| Symbol | |
|---|
| ID | 8631803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 171382 |
|---|
| End bp | 172527 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | sphingosine/diacylglycerol kinase-like enzyme |
|---|
| Protein accession | YP_003312971 |
|---|
| Protein GI | 269793516 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCG AAGCGTGGCT GCTGATCGCA GCGATCGTCG TCTCCCTGAC GGCCATCACC
CTCGCGGTCC TCGTCCTCCG GTCGCAGCGC ACGCTCGGGA GCGCCGTCGC GGCCCCGCAG
GCGCCTGCCG CCGAGCCGAC CGAGGACGAC GCACCACGCG GCCCCCAGCT GGCCTTCGTG
GCGAACCCCT CGAAGAACGG CGCGGAGCAG CTCAAGGCCG CGCTCATGTC GCGCTGCACC
GCCGAGGGGC TCCCCGACCC GATGTGGCTC GAGACCACCG TCGAGGACCC GGGTCTCGGC
CAGACGCGCG AGGCTCTCGC GAAGGGCGCT GACGTCGTGG TCGCCGTCGG CGGCGACGGC
ACCGTCCGTG CGGTCGCGCA GGGCATGGCC GACTCCGGCA AGCCCATGGC GCTGCTCCCC
CTCGGCACGG GCAACCTGCT CGCGCGCAAC CTCGACATCT CCGTGACGGA CCGCGACGAC
GCCTTCGATA TCGTGCTGCA CGGCATCGAC CGCAAGATCG ACGTCGGCTG GCTGCGTGTC
GACGAGCCCG CCGCGCCCCG CGACAAGGAC CGCGAGGGCA ACGGCCCCGC CGACACCGGC
ACGCACATCT TCCTGGTCAT CGCCGGCCTC GGCTTCGACG CCGCGATGGT GGCCGACGCC
GACGACACCC TCAAGTCGAA GGTCGGGTGG ATCGCGTACT TCGTGGCCGG CGTGAAGCAC
CTGCACGGCC GCCGGACCGA GATGACCATC ACCCTCGACG ACCGCCCGCC GATCACCACG
CGCCTGCGCA GCCTCATGGT CGGGAACTGC GGCCGCCTGC CCGGCGGCAT CACGCTGATC
CCCGACGCGA TCATCGACGA CGGGATCCAC GACATCGCGG CGATCGACAC GCGCGGTGGC
CTGATGGGCT GGGTCCAGCT GTTCGGCGAG GTCGTCATGC AGGGCTTCGG CGTCTCCAAC
GACCTGCCCA ACAAGATCGG CCGCATCGAC CACACCCGCG CCAAGGACGT GCACCTCGAG
GTCCCCGAGG GCGAGCAGGT CCAGGTCGAC GGCGATGTCC TGGGCCGTGC CCGGGCGGTC
ACCACCTGGG TCGACCCGAG CGCCCTCGTG GTGCGCGCCC CCGCGCCGCG CCTCAGCCCG
CGGTAG
|
|---|
| Protein sequence | MTLEAWLLIA AIVVSLTAIT LAVLVLRSQR TLGSAVAAPQ APAAEPTEDD APRGPQLAFV
ANPSKNGAEQ LKAALMSRCT AEGLPDPMWL ETTVEDPGLG QTREALAKGA DVVVAVGGDG
TVRAVAQGMA DSGKPMALLP LGTGNLLARN LDISVTDRDD AFDIVLHGID RKIDVGWLRV
DEPAAPRDKD REGNGPADTG THIFLVIAGL GFDAAMVADA DDTLKSKVGW IAYFVAGVKH
LHGRRTEMTI TLDDRPPITT RLRSLMVGNC GRLPGGITLI PDAIIDDGIH DIAAIDTRGG
LMGWVQLFGE VVMQGFGVSN DLPNKIGRID HTRAKDVHLE VPEGEQVQVD GDVLGRARAV
TTWVDPSALV VRAPAPRLSP R
|
|---|
| |