Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_01440 |
Symbol | |
ID | 8631782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 149262 |
End bp | 150581 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | cellobiohydrolase A (1,4-beta-cellobiosidase A) |
Protein accession | YP_003312950 |
Protein GI | 269793495 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GGAGCAGCGA CGAGCCCGAC GCCCCGCAGG GGCCCCGGGA CCCGCGCGAC CCCCGCTACG TGATCCGCGT CCCGCTCGAG GAGACGCCCG AGGAGCCCGA GGTCGTGCCC GTCCGCGGCG GTCGCACCGA GGCCCCCGAG CAGCGCCCGG CGAGCGACTA CGTGATCCGG GCGGCCGAGC CTCCGCAGCA GCCTGCCCGC ACCGAGCCTC CGCGGCAGCC CGCACCCGTC GTCCCGCAGG ACGAGACCGG CCTCGGAGAC GAGGCGGCCT CGGCGGCTCC GGCGTCCGTG CGTCTGCGGA AGAGCCGTCG ACGGCACCCG GCGGACCGCC CTCCCCGCAT CCCCCGACGG CGGCTGTCGC GCCCCGTCCG CTGGGCGCTC GTCCTGGGCT CCGTCGTCCT CCTCGCAGGC GTCGCGGCGC TCGTCGTCGT GCGCACCGGC CTGCTCGACG ACCCCAACCC CTTCGCCGGG CGGGACCTCT ACGTCGACCC CGAGTCCGAG GCGATCAAGG CCGTCGACGC CGCGACCGAC GCGGCCACGC GCGACGCCTT CCTCACCATC GCCGACCAGC CGACCGCCAT CTGGCTGACG CCCGAGGAGT ACCCGGCGGG TGAGGTCGGG CCCTACGTCG CGCAGGTCGT GGCGGACGCC GAGGCGGGCG ACACCCTGCC GGTCTTCGTG GTCTACGGCA TCCCGGACCG CGACTGCGGG CAGTTCTCCG CGGGAGGTAC CACCGTCGAC GGCTACGAGA CGTGGGTCCG CGAGATCGCC ACCGCGCTCG AGGGCACCGA GACCCCTGTG GTCCTCGAGC CCGACGCGCT CCAGCTCGCC GAGGAGTGCG GGGACGTCGA GCGTCGCCTC GGCCTGGTCT CCACGGCAGG CTCGGTGCTC ACCGGGGCCG GGGCGACCGT CTACCTCGAC GGGGGACACT CCAACTGGCA CTCCGTCCAG GAGTCCGCCG ACCTGCTGCG CCGCGCCGGC GTGGCCGACG TGCACGGCTT CGCGACCAAC GTGTCCAACT ACAACGACGA CGCCTCCGAG CTCGCCTACG CCGAGCGCCT GAGCGCCCAG CTCGACGGTG CGCCGTTCGT CGTGGACACC GGTCGCAACG GCAACGGGTC CGACGGCACC TGGTGCAACC CCCCGGGCGC AGCCCTCGGT GCACCGCCGC TCACGCTCGA GGCCGAGGGC CTCGACGCCA ACCTGTGGGT GAAACCTCCG GGGGAGAGCG ACGGGACGTG CGAGGGCGGG CCCGTTGCCG GACAATGGTG GCCTGACCGG GCACTCAGCC TCGTCGCCGG GGCCCGCTGA
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Protein sequence | MARRSSDEPD APQGPRDPRD PRYVIRVPLE ETPEEPEVVP VRGGRTEAPE QRPASDYVIR AAEPPQQPAR TEPPRQPAPV VPQDETGLGD EAASAAPASV RLRKSRRRHP ADRPPRIPRR RLSRPVRWAL VLGSVVLLAG VAALVVVRTG LLDDPNPFAG RDLYVDPESE AIKAVDAATD AATRDAFLTI ADQPTAIWLT PEEYPAGEVG PYVAQVVADA EAGDTLPVFV VYGIPDRDCG QFSAGGTTVD GYETWVREIA TALEGTETPV VLEPDALQLA EECGDVERRL GLVSTAGSVL TGAGATVYLD GGHSNWHSVQ ESADLLRRAG VADVHGFATN VSNYNDDASE LAYAERLSAQ LDGAPFVVDT GRNGNGSDGT WCNPPGAALG APPLTLEAEG LDANLWVKPP GESDGTCEGG PVAGQWWPDR ALSLVAGAR
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