Gene Sked_01440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01440 
Symbol 
ID8631782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp149262 
End bp150581 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content75% 
IMG OID 
Productcellobiohydrolase A (1,4-beta-cellobiosidase A) 
Protein accessionYP_003312950 
Protein GI269793495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GGAGCAGCGA CGAGCCCGAC GCCCCGCAGG GGCCCCGGGA CCCGCGCGAC 
CCCCGCTACG TGATCCGCGT CCCGCTCGAG GAGACGCCCG AGGAGCCCGA GGTCGTGCCC
GTCCGCGGCG GTCGCACCGA GGCCCCCGAG CAGCGCCCGG CGAGCGACTA CGTGATCCGG
GCGGCCGAGC CTCCGCAGCA GCCTGCCCGC ACCGAGCCTC CGCGGCAGCC CGCACCCGTC
GTCCCGCAGG ACGAGACCGG CCTCGGAGAC GAGGCGGCCT CGGCGGCTCC GGCGTCCGTG
CGTCTGCGGA AGAGCCGTCG ACGGCACCCG GCGGACCGCC CTCCCCGCAT CCCCCGACGG
CGGCTGTCGC GCCCCGTCCG CTGGGCGCTC GTCCTGGGCT CCGTCGTCCT CCTCGCAGGC
GTCGCGGCGC TCGTCGTCGT GCGCACCGGC CTGCTCGACG ACCCCAACCC CTTCGCCGGG
CGGGACCTCT ACGTCGACCC CGAGTCCGAG GCGATCAAGG CCGTCGACGC CGCGACCGAC
GCGGCCACGC GCGACGCCTT CCTCACCATC GCCGACCAGC CGACCGCCAT CTGGCTGACG
CCCGAGGAGT ACCCGGCGGG TGAGGTCGGG CCCTACGTCG CGCAGGTCGT GGCGGACGCC
GAGGCGGGCG ACACCCTGCC GGTCTTCGTG GTCTACGGCA TCCCGGACCG CGACTGCGGG
CAGTTCTCCG CGGGAGGTAC CACCGTCGAC GGCTACGAGA CGTGGGTCCG CGAGATCGCC
ACCGCGCTCG AGGGCACCGA GACCCCTGTG GTCCTCGAGC CCGACGCGCT CCAGCTCGCC
GAGGAGTGCG GGGACGTCGA GCGTCGCCTC GGCCTGGTCT CCACGGCAGG CTCGGTGCTC
ACCGGGGCCG GGGCGACCGT CTACCTCGAC GGGGGACACT CCAACTGGCA CTCCGTCCAG
GAGTCCGCCG ACCTGCTGCG CCGCGCCGGC GTGGCCGACG TGCACGGCTT CGCGACCAAC
GTGTCCAACT ACAACGACGA CGCCTCCGAG CTCGCCTACG CCGAGCGCCT GAGCGCCCAG
CTCGACGGTG CGCCGTTCGT CGTGGACACC GGTCGCAACG GCAACGGGTC CGACGGCACC
TGGTGCAACC CCCCGGGCGC AGCCCTCGGT GCACCGCCGC TCACGCTCGA GGCCGAGGGC
CTCGACGCCA ACCTGTGGGT GAAACCTCCG GGGGAGAGCG ACGGGACGTG CGAGGGCGGG
CCCGTTGCCG GACAATGGTG GCCTGACCGG GCACTCAGCC TCGTCGCCGG GGCCCGCTGA
 
Protein sequence
MARRSSDEPD APQGPRDPRD PRYVIRVPLE ETPEEPEVVP VRGGRTEAPE QRPASDYVIR 
AAEPPQQPAR TEPPRQPAPV VPQDETGLGD EAASAAPASV RLRKSRRRHP ADRPPRIPRR
RLSRPVRWAL VLGSVVLLAG VAALVVVRTG LLDDPNPFAG RDLYVDPESE AIKAVDAATD
AATRDAFLTI ADQPTAIWLT PEEYPAGEVG PYVAQVVADA EAGDTLPVFV VYGIPDRDCG
QFSAGGTTVD GYETWVREIA TALEGTETPV VLEPDALQLA EECGDVERRL GLVSTAGSVL
TGAGATVYLD GGHSNWHSVQ ESADLLRRAG VADVHGFATN VSNYNDDASE LAYAERLSAQ
LDGAPFVVDT GRNGNGSDGT WCNPPGAALG APPLTLEAEG LDANLWVKPP GESDGTCEGG
PVAGQWWPDR ALSLVAGAR