Gene Sked_01260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01260 
Symbol 
ID8631764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp128253 
End bp129437 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content74% 
IMG OID 
ProductExodeoxyribonuclease I subunit D 
Protein accessionYP_003312932 
Protein GI269793477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCC TGCACACCTC TGACTGGCAC CTGGGCAGGA CCCTGCACGG CGTCGACCTC 
CTCGACCACC AGGCCGCCTA CCTCGACCAC CTCGTCGAGC TCGTGCGCAG CGAGTCCGTC
GACGCCGTGG TGGTGGCCGG CGACGTGTAC GACCGCGCCA TCCCCCCGGT CGAGGCCGTC
ACCTTGCTCT CGACCGCGCT CGCGCGCCTC GCCGAGATCA CCCAGGTGGT GGTGACCCCC
GGGAACCACG ACTCGGCGAC CCGCCTGGGC TTCGGCGCCG AGCTGTGGCG CGAGGGAGTC
CACGTCCGGG CGCGGGTCGC CGACATCGGC CGACCGGTCG AGCTCGAGAC GACCGACGGC
GCCCCTGCCC TCGTCTACGC CCTGCCGTAC CTCGACCCTG ACGCGGCTCG CACTGTGCTC
CGCGAGGAGG ACGAGCCGCC GCTCGCCCGG TCGCACGAGG CCGTCACCGG AGCCGCGATG
CGCCGGGTGC GCGCCGACCT CGCCGCTCGT GGTGCGACGG TGTCGGCCCG TCCGCGCTCG
CTCGTGGTGG CGCACGCCTT CGTCGTCGGC GGCGAGGCCT CCGAGTCCGA GCGGGACATC
CGCGTCGGCG GCGTCGACAC CGTGCCGGCA GCCGTCCTCG AGGGTGTCGA CTACGTCGCC
CTCGGCCACC TGCACGGCGC GCAGCGCGTC GCGACGGGCG GCGGGACCGT AGGCCGGTAC
TCCGGCTCGC CCCTCGCGTA CTCGTTCTCC GAGATGCGGC AGCGCAAGTC GACCGCCCTC
GTCGACCTCG GGCCGGACGG TGTCGTCGGT GAGCCTCAGC TCGTCCCCGC TCCCGTACCC
CGCCGCCTCA GCGAGGTGAG CGGGTCGCTC GACGACCTGC TCGGCGCAGC TGGCGAGGCG
CACGTCGACG ACTGGGTCCG CGTCACCGTC ACCGACCCCG CGCGACCGCG TGAAATGAAC
GCACGGCTCA AGGCGCGCTT CCCGCACGTC CTGGCCATGG CGCACCGACC CCCTGAGCGG
TCCGCCCGCG AGTCGCTCAC CCTCGCCGTC ACGACAGCGA GCGACCCGCT GGTCGTCGCC
GCAGACTTCG TCGCGCACGT GACCGGGGCG CAGCCCGACG TCCGCGAGTC GGCGGCACTC
CGGCACGCCT TCGAGACGGC CGCCGCGGCA GAGCGGAGCG CCTGA
 
Protein sequence
MRILHTSDWH LGRTLHGVDL LDHQAAYLDH LVELVRSESV DAVVVAGDVY DRAIPPVEAV 
TLLSTALARL AEITQVVVTP GNHDSATRLG FGAELWREGV HVRARVADIG RPVELETTDG
APALVYALPY LDPDAARTVL REEDEPPLAR SHEAVTGAAM RRVRADLAAR GATVSARPRS
LVVAHAFVVG GEASESERDI RVGGVDTVPA AVLEGVDYVA LGHLHGAQRV ATGGGTVGRY
SGSPLAYSFS EMRQRKSTAL VDLGPDGVVG EPQLVPAPVP RRLSEVSGSL DDLLGAAGEA
HVDDWVRVTV TDPARPREMN ARLKARFPHV LAMAHRPPER SARESLTLAV TTASDPLVVA
ADFVAHVTGA QPDVRESAAL RHAFETAAAA ERSA