Gene Sked_01080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01080 
Symbol 
ID8631746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp111659 
End bp112708 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content76% 
IMG OID 
Productsugar kinase, ribokinase 
Protein accessionYP_003312915 
Protein GI269793460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGG GACCACCCGC AGCGCACGGC CGGACCGGTG TGGTGGTCGT CGGGTCGGTC 
AACGCCGACC TGCTCACCAC GGTCGAGCAG CACCCGCGCC CCGGCGAGAC CGTCCTCGGC
CGCACGCTCG ACGTGCTGCC CGGCGGCAAG GGGGCCAACC AGGCCGTCGC CGCCGCGCAG
CTCGGCGCGC AGACCACGCT CGTGGGGGCC GTCGGCACGG ACCAGTTCGC GGAGCCGGCG
CTGGCCGGCC TGCGGGCCGC CGAGGTTGAC CTCGAGGCCG TGGCTGTCGT GGAGGGGGCC
ACCGGCGTCG CGCAGGTGAC CGTCTCCGCC GACGGGGAGA ACGCCATCGT CGTGATCCCC
GGGGCGAACG CGTCCGTGGA CGGTGCGGTG GTCGACGCAC GGGCAGCGGT GATCGCCGGT
GCGGCCGTGG TGGTCGTGCA GGGCGAGATC CCGAGGACCG GGATCGAGGC CGCCGCTCGG
CACACCAGCG GGCGGCTCGT CGTGAACCTC GCGCCCGTGG TCGACGTGGA CCGCGAGGTC
CTGCTGGCCG CGGACCCGCT CGTCGTCAAC GAGCACGAGG CGGCGTTGGT GCTCGCGGCG
CTCGACGGGG AGTCGGGCAT CGCTGAGCGA GATGCTGGTG CGACCGGTGC GACCGGTGCG
ACCGGTGCGA CCGGTGCTGA CGGTGAGCGG CAGGATGCAG AGGACGACGA GCAGCGGGTC
GTCGACGCGC TGCTCGCGCA CGGCGTCCCG TCCGTGGTGC TCACGGTCGG GGCGCGGGGA
GCGCTCGTCG CCGACGGGTC CGGGACCACC CGGGTGCCGT CGCCGCGCGT CGACGCGGTC
GACACGACGG GGGCCGGCGA CGCGTTCGTC GGTGCGCTCG CCCATCGGCT GTCCGAGGGG
GAAGGGCTGG TCGAGGCGGC GAGGCTCGCT GCTCGCGTCG GTGCGTACGC CGTGCGGGGG
AGCGGCGCGC AGCCGTCCTA CCCCTGGGCG GGGGACGCGC TGCCCGAGGT CGAGGACGTC
GACCGCAGCG ACCGCGGGGC CGCGTCGTGA
 
Protein sequence
MAGGPPAAHG RTGVVVVGSV NADLLTTVEQ HPRPGETVLG RTLDVLPGGK GANQAVAAAQ 
LGAQTTLVGA VGTDQFAEPA LAGLRAAEVD LEAVAVVEGA TGVAQVTVSA DGENAIVVIP
GANASVDGAV VDARAAVIAG AAVVVVQGEI PRTGIEAAAR HTSGRLVVNL APVVDVDREV
LLAADPLVVN EHEAALVLAA LDGESGIAER DAGATGATGA TGATGADGER QDAEDDEQRV
VDALLAHGVP SVVLTVGARG ALVADGSGTT RVPSPRVDAV DTTGAGDAFV GALAHRLSEG
EGLVEAARLA ARVGAYAVRG SGAQPSYPWA GDALPEVEDV DRSDRGAAS