| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_01010 |
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| Symbol | |
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| ID | 8631739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 100768 |
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| End bp | 105450 |
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| Gene Length | 4683 bp |
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| Protein Length | 1560 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003312908 |
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| Protein GI | 269793453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.573164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGG CACCGAACTC CCCCGCCCCC CAGGACCCGC AGCGGCCGGG GAGCGACGCG
CCCGCAGCCG GTGCCGGCGG ACCCACCCGA CGAGACGGCG GCGGACGCCG TCGTGGCCGC
GGTGGGCGCG GACGCGGACA GAGCGCGGAG AAGCCTGCAG AGCCGGGCGG CCGTCCTGCC
GACGCGGCTG GCGCGCAGGG CGACGAGGCC CGTGAGCCTG CCCCGCGTCG TGACGAGCGA
GGTGGCGAGC GCCGCGGAGA GCCACGCCGC GGCGACGAGC GCCGAGGCAA GGACCGCCGC
ACCGGTGACC GCCGCCCGCG CGTCGACCAC GCACGCCTGG AGCGCGCTGC GGCGGCCCGC
ACCGCCGTCG ACCTCCCGCC GATCGTCTTC CCCGAGCAGC TGCCCGTCTC GGCGCGCCGC
GAGGACATCG CGGCGGCGAT CCGCGACCAC CAGGTGGTCA TCGTCGCGGG CGAGACCGGC
TCGGGCAAGA CCACCCAGCT CCCCAAGATC GCCCTCGAGC TGGGCCGTGG CCGCGCCGGG
CAGATCGGCC ACACCCAGCC TCGCCGCATC GCGGCGCGCA CCGTCGCAGA GCGCATCGCC
GAGGAGATCG GCACCCCGCT CGGCGAGATC GTCGGCTACC AGGTGCGGTT CACCGACACC
TCGTCGGAGA ACACCCTGGT CAAGGTGATG ACCGACGGCA TCCTGCTCGC GCAGATCCAG
CGCGACCCGC AGCTCCTCGC GTACGACACC CTCATCATCG ACGAGGCGCA CGAGCGCTCC
CTCAACATCG ACTTCATCCT CGGGTACCTC ACACAGCTGC TGCCGCAGCG CCCGGACCTC
AAGGTGATCA TCACCTCGGC GACCATCGAC TCCGACCGTT TCGCCCGGCA CTTCGCCCCG
CGCGACGCGC AGGATGCAGC GAAGGCGGCT GCGCAGACCG AGCCGGTCGA CGGCACCGAT
GACACCTCCG CCGACGACGC CCCCATGGCA CCCGTCGTCT CCGTCACCGG CCGCACCTTC
CCCGTCGAGG TCCGCTACCG CCCGCTCACA CCCGAGGACT CCTCGGCCAA GAAGGGCGCC
GAGCGCGACC TCATGACGGG CATCTGCGAC GCGGTCGACG AGCTCTGCGC CGAGGGACCG
GGCGACATCC TCGTGTTCCT GTCGGGCGAG CGCGAGATCC TCGACGCCCA GGACGCCCTG
GCGAGCCACC TGGGCGCACG CGTGAACGAC CCACGCCGCC CGGACCACGT CGAGATCATG
CCGCTCTACG CCCGGCTCTC GGCCGCCGAG CAGCACCGCG TGTTCCAGTC CCACCCCGGG
CGCCGCGTGG TGCTGTCGAC CAACGTCGCC GAGACCTCGC TCACCGTTCC GGGCATCCGG
TACGTCGTCG ACCCGGGCAC GGCGCGCATC TCGCGCTACT CCAAGGCCAC CAAGGTGCAG
CGCCTGCCGA TCGAGCCCAT CGCGCAGGCG TCGGCCAACC AGCGCTCCGG TCGCTGCGGC
CGTGTCGCCG ACGGCATCGC GATCCGCCTC TACTCCGAGG ACGACTTCCT CTCCCGCCCC
GAGTTCACCG AGCCCGAGAT CCTGCGCACC TCCCTCGCCT CGGTCCTGCT GCAGATGATC
TCGGTCGGCG TGGTCCGTAC CCCGGACGAC GTCGCGCGCT TCCCCTTCGT CGAGCCGCCG
GACACCCGCG CCATCCGCGA CGGCGTGCAG CTGCTCACCG AGCTCGGCGC GCTCGAGACG
CGCAAGCCCG AGCGACGCGG GGCCACGTCC CGCCCGGCGG GCACTCACGT CGAGGGAGGC
TCGTCGGCCC CGTCGGACGA GCGCGCCTCG CGCGACGCGC TCGGCTCCGG CGGCGGGACC
CGCCTCACCG AGACCGGCCG TGCGATCGCC CAGCTGCCCA TGGACCCGCG CCTGGCCCGC
ATGATCGTCG AGGGCGGGCG CCGCGGCGCC GCCCGCGAGG TGATGATCAT CGCCGCCGCG
CTCTCCATCC AGGACCCGCG CGAGCGGCCG ACCGAGCAGC GCGCGCAGGC CGACCAGCAG
CACGCGCGCT TCACCGACCC GACCTCGGAC TTCCTCAGCT ACCTCAACCT CTGGGAGTAC
GCGCGGGCCC AGCAGCGCGA CCTGTCGTCC TCGGCCTTCC GCCGGCTGTG CCGGGCGGAG
CACCTGAACT TCCTGCGCAT CCGCGAGTGG CAGGACGTCG TCGGGCAGCT GCGTGACATG
TCCAAGCCGC TCGGCATCGT CATGAACGCC CCCGGGCGAC GCTCCGGCGG GTCGAGCACC
GACGAGCCCG TGGCCGACCT CGACCTGCGA CAGACGTGGG ACGGCGACAC GATCCACCAG
TCGCTGCTCG CCGGGCTGCT CTCGCAGATC GGTATGCAGG AGGCCACCGA GGTCAAGGCA
TCCGCCGTCA AGGGCCGCGA GACCGCGGCC GACCGCCGAG CCAAGAAGTT CGCGCGCAAC
GAGTACCTCG GCGCGCGCGG GGCCCGCTTC GCGATCTTCC CCGGCTCCGG CCTCGCCAAG
AAGCCGCCGG TCTGGGTGAT GGCCGGCGAG CTCGTCGAGA CCTCGCGCCT GTGGGGCCGC
GACGTCGCGA AGATCCAGCC CGAGTGGGCC GAGGACCTCG CCGCGCACCT CGTCAAGCGC
ACCTACTCCG AGCCGCACTG GTCGAGCAAG CAGGGCGCCG CGCAGGCGAT CGAGAAGGTG
CTGCTCTACG GCGTGCCCAT CGTCGCCGAC CGCAAGGTCC TGTTCTCCAA GGTGGACCCG
GAACAGGCGC GCGAGCTGTT CATCCGGCAC GCCCTGGTGC AGGGCGAGTG GACCACGCAC
CACACCTTCT ACGCCGACAA CCGACGCCTG CTCGACGAGG CGGCCGAGCT CGAGGCCAGG
TCCCGGCAGC GTGGCCTGGT GGTCGACGAC GACGCGCTCT TCGCCTTCTA CGACGAGCGC
GTCCCCGCGT CCGTGGTGTC CGCGCGGCAC TTCGACCAGT GGTGGAAGTC CGCGCGCCGC
GAAGACCCCG ACCTGCTGAC CTTCACGCTC GACCTGCTCG TCCCCGAGGG CACCGAGGTG
TCGGCCGAGG ACTTCCCGCA GGAGTGGGTC CAGGGCGACC TCACGCTCCC CCTCACCTAC
CAGTTCCAGC CCGGGACGGA CGCTGACGGG GTCACCGTGC ACGTGCCCAT CTCGGTGCTC
AACCGGGTGG TCCCCGACGG CTTCGACTGG ATGGTCCCCG GCCTGCTCGA CGAGCTCACC
ACGGCGACCA TCCGCGCGCT GCCCAAGCCG GTGCGCGTGC AGCTGGTGCC CGCGCCGGAC
GTCGCCCGCG GCGTCGTCGC GTGGATCCGC GAGAACACCC CGGCCTGGGG CGATGTCACC
CGGGCCGGCG ACATGGCCGA GTCCTACGAG TCCGCCTTCA CGCGTGCGGT CAAGGCGCTG
CGCGACGTGG ACGTCCCCGA GGACGCCTGG GACCGCGAGC GGCTCCCCGG GCACCTGCGG
ATGACCTTCC GGGTCTTCGA GGAGCGCGGC GGACGCGGCT CCGGCCCGCG CGGCGAGGTC
GTGCTCGACG AGTCCAAGGA CCTCGTCGCG CTCCAACGTC GTCTCGCCGC GCAGTCGCAG
GCCGCGGTCC GGTCTGCGGT CAAGAGCGCC GTCGGCACCG CGCTCCGCGA GGCGCAGCAG
GAGGCCCAGG ACGCCGCGGC AGCGAGCCAG AAGGCCGGTA CAGGTGCACC GGGGGCCGCG
GCAGCGACCG GTGGACCGAC CGCGCCAGCA GCGTCGACCC CTGACGCACC GACGGGCGTC
ACCGTCGCCG AGGTCGCCTC GCTCGCGACG TGGCCCTCCG CCCTGCCCGA CGGCGTGCTC
CCGGCCCAGG TCGACACCCC GGGCCCCGGC GGCATGGTCG TGCGCGGCTA CCCCGCGCTC
GTCGAGGAGA GGTCGGGGAG CACCACCACG GTCGCGCTCC GGGTGCTCGC CGACGCGTCG
CGCCAGGAGG TCGAGCACAC CCGTGGCGTC CGTCGGCTGC TGCTCGGGGA GACCGCGCTG
CAGCAGTCGC GCATCACCTC GCGGTGGTCC GGCACGCAGT CGCTCACGCT CGCGGCGAGC
CCGTACAAGA ACACCGGCGC GCTCGTCGCC GACCTCCAGC TCGCCGCGGT CCAGTGCCTC
ACGCCCGACG CCGGCCAGGT CCGCGACCTC GCGGCGTACA CGGCCATGCG GACGGCGGTG
AAGAAGGCGC TCGAGGAGGA GATCCACACC GTGGTCGGCC ACGTGGTCGC CGCGCTCACC
GCGGCGCGCA CCGTCGACGG CGAGATCCGG TCGTCGAGCT CGCTCGCGCT CCTCAACACC
CTCGCCGACG TCCGTGACCA CGTCGCGGGG CTCGTCTACG ACGGCTTCGT GGCGGCGACG
CCGCCAGGAC GCCTGCCGCA CCTCGCGCGC TACCTGCGCG CGGCGTCCTA CCGGCTCGAG
AAGGCCGCGA GCAACCCGAA CCGCGACGCC GAGCTCGCGT GGAAGGTGCA CGACGTCGAG
GATGCCTACG ACGCGGCCCG CGCCGCGTAC GCGGCAGGCC GCCCGGACCC CGCACGGGCC
TCGGAGCTCG CGCAGGCTCG CTGGATGATC GAGGAGCTGC GCGTCTCGCT GTTCGCCCAG
CAGCTCGGCA CCGACGGGCC GGTGAGCGAG AAGAGGATCA GGAAGCTCCT CGCCGGGGGC
TGA
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| Protein sequence | MSTAPNSPAP QDPQRPGSDA PAAGAGGPTR RDGGGRRRGR GGRGRGQSAE KPAEPGGRPA
DAAGAQGDEA REPAPRRDER GGERRGEPRR GDERRGKDRR TGDRRPRVDH ARLERAAAAR
TAVDLPPIVF PEQLPVSARR EDIAAAIRDH QVVIVAGETG SGKTTQLPKI ALELGRGRAG
QIGHTQPRRI AARTVAERIA EEIGTPLGEI VGYQVRFTDT SSENTLVKVM TDGILLAQIQ
RDPQLLAYDT LIIDEAHERS LNIDFILGYL TQLLPQRPDL KVIITSATID SDRFARHFAP
RDAQDAAKAA AQTEPVDGTD DTSADDAPMA PVVSVTGRTF PVEVRYRPLT PEDSSAKKGA
ERDLMTGICD AVDELCAEGP GDILVFLSGE REILDAQDAL ASHLGARVND PRRPDHVEIM
PLYARLSAAE QHRVFQSHPG RRVVLSTNVA ETSLTVPGIR YVVDPGTARI SRYSKATKVQ
RLPIEPIAQA SANQRSGRCG RVADGIAIRL YSEDDFLSRP EFTEPEILRT SLASVLLQMI
SVGVVRTPDD VARFPFVEPP DTRAIRDGVQ LLTELGALET RKPERRGATS RPAGTHVEGG
SSAPSDERAS RDALGSGGGT RLTETGRAIA QLPMDPRLAR MIVEGGRRGA AREVMIIAAA
LSIQDPRERP TEQRAQADQQ HARFTDPTSD FLSYLNLWEY ARAQQRDLSS SAFRRLCRAE
HLNFLRIREW QDVVGQLRDM SKPLGIVMNA PGRRSGGSST DEPVADLDLR QTWDGDTIHQ
SLLAGLLSQI GMQEATEVKA SAVKGRETAA DRRAKKFARN EYLGARGARF AIFPGSGLAK
KPPVWVMAGE LVETSRLWGR DVAKIQPEWA EDLAAHLVKR TYSEPHWSSK QGAAQAIEKV
LLYGVPIVAD RKVLFSKVDP EQARELFIRH ALVQGEWTTH HTFYADNRRL LDEAAELEAR
SRQRGLVVDD DALFAFYDER VPASVVSARH FDQWWKSARR EDPDLLTFTL DLLVPEGTEV
SAEDFPQEWV QGDLTLPLTY QFQPGTDADG VTVHVPISVL NRVVPDGFDW MVPGLLDELT
TATIRALPKP VRVQLVPAPD VARGVVAWIR ENTPAWGDVT RAGDMAESYE SAFTRAVKAL
RDVDVPEDAW DRERLPGHLR MTFRVFEERG GRGSGPRGEV VLDESKDLVA LQRRLAAQSQ
AAVRSAVKSA VGTALREAQQ EAQDAAAASQ KAGTGAPGAA AATGGPTAPA ASTPDAPTGV
TVAEVASLAT WPSALPDGVL PAQVDTPGPG GMVVRGYPAL VEERSGSTTT VALRVLADAS
RQEVEHTRGV RRLLLGETAL QQSRITSRWS GTQSLTLAAS PYKNTGALVA DLQLAAVQCL
TPDAGQVRDL AAYTAMRTAV KKALEEEIHT VVGHVVAALT AARTVDGEIR SSSSLALLNT
LADVRDHVAG LVYDGFVAAT PPGRLPHLAR YLRAASYRLE KAASNPNRDA ELAWKVHDVE
DAYDAARAAY AAGRPDPARA SELAQARWMI EELRVSLFAQ QLGTDGPVSE KRIRKLLAGG
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