| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_00770 |
|---|
| Symbol | |
|---|
| ID | 8631715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 77555 |
|---|
| End bp | 79678 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_003312884 |
|---|
| Protein GI | 269793429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.233657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCGAG AGATCGCGCA CGGGTGCACC AAGTCCGGCG ACGAGATCCT CGCCACCATC
CAGGGGCTGA GGGGCGAGGA GCAGTTCACC ACGATCCGGC ACCGTGGGGA CTTCGACGCG
AACATCCCCG AGAACAGCCT CACCGCGTTC GAGGAGAGCT ATCTCCGATG CCGGCCAGGG
ATCGAGACCG ACCTCCGCCG CACGGCAGAC AACACCTTGG TGATGTTCCA CGACACGCAC
GTCGGCAAGA TGCTCGAGCC GTCGTACGAC CCCCTGACCG GACAGGGACC GAACGCGGCG
CTCAGCAGCC TGACATGGGA CCAGCTGCAG CAGAAGACCT TGGTGAACAT CACCCGAGAA
CCGCAGGCCG GCGAGAAGGT ACCGAGCCTC GACCAGTTCC TCGACCACTA CCGCCGCGTC
GGGGGCCAGT CGTTGCTCTA CGTCGAGATC AAGAACAGCA CGAACGAGAA GGCCGCCGCG
CAGGCCGAGA TCATGGACGC GGTCGAGCAG GTCGCTGCCT TCCACCGGGC ACATCCCGAG
GTCGGCATCT TCGACCGGGT CGTCTTCAAG TTCCGGATGA GCGCCTTCCC GCTCTTCCCC
GAGTGGGCGG AGCGCACACG GGCCATCCCT GACCTCCCGC GCGTACCGCT GACCCAGGTG
CAGGTCTCCC GTCAGATCGC CCGCGACCTC GCCAGCGACA CCACCATCCC AGGGCACGAC
GGACCTGCCG GCCTGCGGAT GGAGGCCGCT GTGCACAGCT GGTCGACGCA CAGCGCGACC
ACCGACGGCG TCCTCTCGGT CGAGGTCACC ATGAAGGACT CCACGGGATA CACGGAGACA
GACATGCGCG GCCTCTCTGA CCAGCTCCCC TTCCCCTTCC GCGGAGTCAC CTATCACTCC
CCGCACGACG ACTCCTCCGC CCAACCCGGG ACGATGGCGT CGGCGGTCGA CGTCGTCCAC
TTCTTCGACA AGCCCCTCGG CCAGTTCGTC CCCGTCCCCG ACTGGGTCAT GTTCCGTGCC
CCCGGGTCCT TCAGCTGGGA CGACGTGCTG CCGAACGTCG ATGCCGGTCA CTCGAGGACT
CCCGTCACAC CGATGGAGGC CTTCTTCAAC AACAGCTCGC AGTGCTGCTA CTCCCTGCGC
GATCGCGTGG ACGACCACGC GCAGCTGGAC GACGACCCAG AGCAGAACGA CCAGCGGATC
CTGCTGCCGT GGCTCGAGGA CATCAAGGCC ACGGTGCTGA CGGCCGACGA CACCGACAGC
ATCGACGCCT ACTTCACCAC CCGCGGGAAG AAGCTCGACG CCGGCGACCA CAGCGTCAGC
CCGAACCGCC CCGACCCGAC GATGAACTCG CTGATCTACC CCGGCTCGAC CCGGTTCCCG
TCGCTGATGA AGTTCGTCAC GGTGGAGCTC GCACCGCGAG GGGACCCCAG GTCATGGTTC
GTCCAGGGGA GCGCGGTGGT CTCCGAGGAC AGGCCCACGT CCCAGCAGAA GGCGGCTCGG
GTCGTCTCCC ACGACGGGCC CGCGGGGTTG ATGGCGGTCT ACGGGCAGGC CACCCTGACG
GTCGACATCG CGTGGTCCTG GTACGACTCG CCGGACGTGC GGAACGACGA GACCAGGACC
ACCTGGGTGA TCCCAGAACA CCTCTCCGAC GGTCGGCACT CCTTCCCGGC GCAGGTCGGC
ACGACCACCG TCGACGTCCA CGTCACGCTG TCGAGACGAT GGGCCTCCGC GACAGACGCG
AGCATCGAGG TCGTGCGGAC CGACCGGTCC TCGCTCTGGG GCATGGTGTG CGGAGGTTCG
CTCCACACCC CGACCGACGT CTCGCGGTGC AACTGGTTCG ACCAGGCAGG GTCCAAGCTG
CTCGACCTCC CCTCCTATCG TCCGACCGAG GTGAGGCCCG GCGACGTCAT CGGCATCAGC
TCCTCGCACG GGGCCCGTCC GCTCACCGTC AGCACCGCAC TCTGGGGCCG AGGGTGGAAC
GACGTCCCCG TCTCGATGTC GTCCTCACGG ATCGACGCCG CCGGCCGGTG GGACACGCCG
CTCTCGGTAC CAGCGCCCGG CGACCACGGC CTCGTCGACG TCCGCTACGT GCTGCGCGCG
GACAGCTACC GGACACCGCT CTGA
|
|---|
| Protein sequence | MAREIAHGCT KSGDEILATI QGLRGEEQFT TIRHRGDFDA NIPENSLTAF EESYLRCRPG
IETDLRRTAD NTLVMFHDTH VGKMLEPSYD PLTGQGPNAA LSSLTWDQLQ QKTLVNITRE
PQAGEKVPSL DQFLDHYRRV GGQSLLYVEI KNSTNEKAAA QAEIMDAVEQ VAAFHRAHPE
VGIFDRVVFK FRMSAFPLFP EWAERTRAIP DLPRVPLTQV QVSRQIARDL ASDTTIPGHD
GPAGLRMEAA VHSWSTHSAT TDGVLSVEVT MKDSTGYTET DMRGLSDQLP FPFRGVTYHS
PHDDSSAQPG TMASAVDVVH FFDKPLGQFV PVPDWVMFRA PGSFSWDDVL PNVDAGHSRT
PVTPMEAFFN NSSQCCYSLR DRVDDHAQLD DDPEQNDQRI LLPWLEDIKA TVLTADDTDS
IDAYFTTRGK KLDAGDHSVS PNRPDPTMNS LIYPGSTRFP SLMKFVTVEL APRGDPRSWF
VQGSAVVSED RPTSQQKAAR VVSHDGPAGL MAVYGQATLT VDIAWSWYDS PDVRNDETRT
TWVIPEHLSD GRHSFPAQVG TTTVDVHVTL SRRWASATDA SIEVVRTDRS SLWGMVCGGS
LHTPTDVSRC NWFDQAGSKL LDLPSYRPTE VRPGDVIGIS SSHGARPLTV STALWGRGWN
DVPVSMSSSR IDAAGRWDTP LSVPAPGDHG LVDVRYVLRA DSYRTPL
|
|---|
| |