| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_00630 |
|---|
| Symbol | |
|---|
| ID | 8631701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 63539 |
|---|
| End bp | 64294 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003312870 |
|---|
| Protein GI | 269793415 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.110321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCACCGG AGCTCTCTGT GCCGACGGCG CACGACGACG ACCCTCCGGG GGAGCCGAGC
CTCGCCGGCG CGGCAGACGG ACCGCGCACC CTGGACGTGG GGGCGGGGGT CGAGACGCTC
ACCGACCAGG GCACGATCGT CGCGCTGCTG GCCGAGCTCA TCGCCACCGC GACCACCAGC
CTGTGGGGCG CGCACCCGGG TGCTGGCTTC GGACCCGACC ACGTGGAGAC CTGGTGGGGT
CCTGTGTCCG ACATGGCGGC TCGCGACGTC GAGGTCCGCA CGCTGCTGCA GCACAGCACC
CGGGCCCAGA CCGCCACGCA GAGCTACGCC GCGCTCGCGC TGCCCGCAGG CGTGCTCATC
CGGACCGTCC CGGTGATCGC CGCCCGGACC CTCATCTTCG ACGACACCAC GGCCCTCGCC
ACCCGGTTCG TCGAGGGCCG TTCGGAGGGT GCGCTGCTCA TCCGGGACCC CGGTCTCGTC
GCCTACCTCG CCCGCGGCTA CGAGGCGGAC TGGGCCCTGG CCCAGGACTT CCCGGCGCTC
CTCGACGCCG AGGGGCAGAC GGTGGAGATC GACCAGACGG CTCGGACGGT GCTCGCGCTG
CTCGCCGACG GCCACAAGGA CGAGGTCGTG GCCCGGCGCC TCGGCTGCTC CGTGCGGACC
GCCCGGCGCC ACGTCTCCTC CCTCATGGAG CTCCTGGACT CCAGCAGCCG GTTCCAGGCG
GGTGCGCGGG CGGCCCAGGC AGGCCTGCTC GACTGA
|
|---|
| Protein sequence | MSPELSVPTA HDDDPPGEPS LAGAADGPRT LDVGAGVETL TDQGTIVALL AELIATATTS
LWGAHPGAGF GPDHVETWWG PVSDMAARDV EVRTLLQHST RAQTATQSYA ALALPAGVLI
RTVPVIAART LIFDDTTALA TRFVEGRSEG ALLIRDPGLV AYLARGYEAD WALAQDFPAL
LDAEGQTVEI DQTARTVLAL LADGHKDEVV ARRLGCSVRT ARRHVSSLME LLDSSSRFQA
GARAAQAGLL D
|
|---|
| |