Gene Sked_00600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00600 
Symbol 
ID8631698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp61358 
End bp62254 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content74% 
IMG OID 
Productglycosyl transferase 
Protein accessionYP_003312867 
Protein GI269793412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0724725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CCGAGGGCAC CGCCCCGGTC CCGGGGCGCC TGGACATCAC CGTGGTCATC 
CCGGTCAAGG ACGACGCCGT GCTCCTCGCA CGGTGCCTGG AGGCGCTGGC CCTCCAGACC
CGGCGCCCCT TCGAGGTCGT GGTGGTCGAC AACGCCTCGA CCGACGACAG CGCCGCGGTC
GCGCGGGCGG CCGGCGCACG GGTGGTCGTC GAGCCGACCG TCGGGATCCC CGCGGCGGCC
TCGCGCGGGT ACGACGCGGT CCAGGGCGGG ATCATCGCGC GGTGCGACGC CGACACGCTG
CCACCCACGG ACTGGCTGGA CCGCGTGCAC CGGTCCTTCG TCGCCGACCG CGAGCTCTCC
GCCGTCACCG GTGCGGGGAC CTTCTACGAC CTTCCCCGCC TGCGCGGGCG CGCGGCACGG
GTCTTCTACA TGCGCGGGTA CTTCTGGGGC ATGCGCGCCG CCCTCGGCAA CGTGCCGCTG
TGGGGGTCCA ACATGGCGAT CCGGGTCACG ACGTGGCACG AGGTCCGCCA CCTGGTGCAC
CGGGACGACC CGACGGTCCA CGACGACACC GACCTCAGCT TCCAGCTCGG CGCCAGGGCC
CGGGTCCGGT ACGACCCGCT CCTCACGGTC GGGGTCTCGG GGCGGACCTT CGCCTCTCCG
GCCAGCCTCG GCCGACGGTT CCGCTGGGCG CGACGGACGC TCGAGGTCAA CTGGGCCGTC
CGCCCGCCGT GGGACAGGTG GGCTGACCGC CTGACCGCTC CACGGGGTGA CGCTCCGCGC
CAGCTCGCGG GCGGCCCGGT CCCGCTGCAG CTCCCCACGG GCTCGACCCC TCGCCAGGTT
CGAGCACAGA AATCCCGCGA TGTGGACGGT GTAGACCGGA TCGTGGATAG ATCGTAG
 
Protein sequence
MSTAEGTAPV PGRLDITVVI PVKDDAVLLA RCLEALALQT RRPFEVVVVD NASTDDSAAV 
ARAAGARVVV EPTVGIPAAA SRGYDAVQGG IIARCDADTL PPTDWLDRVH RSFVADRELS
AVTGAGTFYD LPRLRGRAAR VFYMRGYFWG MRAALGNVPL WGSNMAIRVT TWHEVRHLVH
RDDPTVHDDT DLSFQLGARA RVRYDPLLTV GVSGRTFASP ASLGRRFRWA RRTLEVNWAV
RPPWDRWADR LTAPRGDAPR QLAGGPVPLQ LPTGSTPRQV RAQKSRDVDG VDRIVDRS