Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00580 |
Symbol | |
ID | 8631696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 57806 |
End bp | 60163 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | methionine synthase (B12-independent) |
Protein accession | YP_003312865 |
Protein GI | 269793410 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.162859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC ATACTGAGCT CAGCTCTGAC CAGCAGAACC CGACCTTTGC CGCTTTCCCG GCAGCGACCA TCCTCGGCTA CCCCCGCATC GGGCCGCGCC GCGAGCTCAA GAAGGCCGTC GAGTCCTTCT GGGCCGGCCG CATCGACGCC GACCAGCTCG AGGAGACCGC CGCAGCACTG CGGAAGTCGA CCCGCGACCG CCTCGTCGCG CTCGGCCTGT CCGCCACGGA CGGCTCCGTC CCCGAGACCT TCTCGTACTA CGACCAGGTC CTCGACGCCG CGGTGACCGT CGGCGCCGTG CCCGAGCGCT TCGCGACCGA GGGCGACCTC GACCTCGCCG GGTACTTCCG TGCCGCCCGC GGCGAGGGCG ACGACGCCCC GCTCGAGATG ACCAAGTGGT TCGACACCAA CTACCACTAC CTCGTGCCCG AGATCGGCCC GTCCACCACG TTCCGCCTCG CCTCCGACCG CGTGGTGCGC CAGTTCGCCG AGGCCCTGGC CGACGGCGTG ACGACCCGTC CCGTGCTCGT CGGCCCGGTG ACCTTCCTGC TCCTCAGCAA GGCTGCGGAC GACGCCCCCG CCGGCTTCGA GCCGCTGTCG CGTCTCGCCG ACCTGCTCCC CGTCTACGCC GAGCTGCTCC GGGCGCTGGC CGCCGCCGGG GCTACCTGGG TCCAGCTCGA CGAGCCCGGT CTCGTGACCG ACACGATCGA CGTGCCGCTG GGCGACGTCC TGACGGCCGT CACCGAGGCG TACCGCGTGC TCTCGACCGA GCTGGCCCGT CCCGAGCGTC CGGCCATCCT GCTCGCCGCA CCCTTCGGCG ACCTCCAGGA GGCCCTCCCG GTCGTGGCCG GGACCGACGT CGAGGCCCTC GCGGTCGACC TCGTCAAGGG TTCTGCGCCC ACCTCGCCGG TGCGCGGCCT GGAGTCCAAG ACCCTCGTCG GCGGCGTCGT CGACGGGCAC AACATCTGGC GCGCCGACCT CTCCGCCAGG CTCGAGGTGC TCGAGGCTCT CGAGGGCCTC GGCGCCGGGG CCGTCGCGGT CGGCACCTCG ACGTCGCTCC AGCACGTCCC GCACGACGTG GCCGACGAGC CCGCGCTCGA CCCGACGCTC GCGAGCTGGC TCGCCTTCGC CGACCAGAAG GTCGCCGAGG TCGTGACGCT CGCAGAGGGG CTGCGCGAGG GCCGCGAGGC CGTGCACGAG CAGCTGCTCG CCGCGAGCGC CGCCGTCTCC TCGCGCGCCA CCGCAGCAGG GGTGTCGGTC GCCGCGGTCC GCGAGCGCAC CGCGGCCCTG ACCGACGGCG ACTTCCACCG CGGCCCGGCG CAGGAGCGTC GTGACGCCCA GCAGGAGCGG CTGGACCTGC CGCTGCTGCC GTCGACGACC ATCGGGTCGT TCCCGCAGAC CGTCGAGATC CGCAAGGCTC GCGCCGCGCA CGCGAAGGGC GAGCTGTCCC TCGAGGCGTA CGAGGACGCG ATGCGTGCCG AGATCCAGCA GGTCGTGGAG CTGCAGGAGC GGATCGGCAT CGACGTGCTG GTGCACGGCG AGGCCGAGCG CAACGACATG GTGCAGTACT TCGCGGAGCT GCTCGACGGC TTCGCGGTGA CGCAGAACGG CTGGGTGCAG TCCTACGGGT CTCGCTGCAC GCGCCCGTCG ATCCTCTGGG GCGACGTGTC GCGCCCGGCG CCGATGACGG TGCGCTGGAC GGAGTACACG CAGTCGCTCA CGACCAAGCC GGTCAAGGGC ATGCTCACGG GCCCGGTGAC GATCATGGCC TGGTCCTTCG TGCGGGACGA CATCCCCCTG GGCGAGACGG CCAACCAGAT CGGCCTGGCG CTGCGCGACG AGATCGCCGA CCTCGAGGCG GCCGGCATCG CGATCATCCA GGTCGACGAG CCGGCGCTGC GCGAGCTGCT GCCGCTGCGC CGCGCGGACC AGCCGGCGTA CCTCGACTGG TCGGTCGGGT CGTTCACGCT GTCGACCGCC GGGGTGCGCC CGGACACCCA GATCCACACG CACCTGTGCT ACTCGGAGTT CGGCGAGGTC ATCGGCGCGA TCGACGCCCT CGACGCCGAC GTCACGTCCA TCGAGGCAGC CCGCTCGCGC ATGGAGATCC TCCCCGACCT CAACGCCTCC GGGTTCTCCC GCGGCGTCGG TCCGGGTGTC TACGACATCC ACTCCCCGCG CGTGCCGTCG CAGGAGGAGG TCACCGAGCT CCTCGAGCTC GCCGTGAAGT CCGTCGACCC GGCGCTGCTC TGGGTCAACC CCGACTGCGG CCTCAAGACC CGCGGCTATG CCGAGACGAC CCCGTCCCTC GAGCACCTGG TCGGCGCGGC GAAGGCAGTG CGCAGCCAGC TGGGTTGA
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Protein sequence | MTTHTELSSD QQNPTFAAFP AATILGYPRI GPRRELKKAV ESFWAGRIDA DQLEETAAAL RKSTRDRLVA LGLSATDGSV PETFSYYDQV LDAAVTVGAV PERFATEGDL DLAGYFRAAR GEGDDAPLEM TKWFDTNYHY LVPEIGPSTT FRLASDRVVR QFAEALADGV TTRPVLVGPV TFLLLSKAAD DAPAGFEPLS RLADLLPVYA ELLRALAAAG ATWVQLDEPG LVTDTIDVPL GDVLTAVTEA YRVLSTELAR PERPAILLAA PFGDLQEALP VVAGTDVEAL AVDLVKGSAP TSPVRGLESK TLVGGVVDGH NIWRADLSAR LEVLEALEGL GAGAVAVGTS TSLQHVPHDV ADEPALDPTL ASWLAFADQK VAEVVTLAEG LREGREAVHE QLLAASAAVS SRATAAGVSV AAVRERTAAL TDGDFHRGPA QERRDAQQER LDLPLLPSTT IGSFPQTVEI RKARAAHAKG ELSLEAYEDA MRAEIQQVVE LQERIGIDVL VHGEAERNDM VQYFAELLDG FAVTQNGWVQ SYGSRCTRPS ILWGDVSRPA PMTVRWTEYT QSLTTKPVKG MLTGPVTIMA WSFVRDDIPL GETANQIGLA LRDEIADLEA AGIAIIQVDE PALRELLPLR RADQPAYLDW SVGSFTLSTA GVRPDTQIHT HLCYSEFGEV IGAIDALDAD VTSIEAARSR MEILPDLNAS GFSRGVGPGV YDIHSPRVPS QEEVTELLEL AVKSVDPALL WVNPDCGLKT RGYAETTPSL EHLVGAAKAV RSQLG
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