Gene Sked_00490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00490 
Symbol 
ID8631687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp49666 
End bp50811 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID 
Productaminomethyltransferase 
Protein accessionYP_003312857 
Protein GI269793402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.155954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CACGCTCCAC CCCACTGCAC GACGAGCACC TGGCGCTCGG TGCCTCGATG 
ACGGAGTTCG GCGGCTGGAT GATGCCGCTG CGCTACGGCT CCGACATCGC CGAGCACACC
GCGGTGCGCT CGGCCGCCGG GCTGTTCGAC CTGTCCCACA TGGGCGAGAT CGAGGTGTCA
GGACCGGGCG CCGGTGCGGC GCTCGACCAC GCCCTCGTCG GGTGGCTCAG CACCCTCGAG
GTCGGGCGTG CCCGCTACTC GATGATCGCC CAGGAGGACG GCGCAGTGGT CGACGACCTC
GTCGTCTACC GCACGGCGGA CGAGACCTTC CTCGTGGTGG CCAACGCCGG CAACGCCGAG
GTGGTGCTCG CCGCGCTCGA GGAGCGGGTG GTGGGCTTCG ACGCCCAGGT CACCTTCACC
TCGCCCGAGG TCGCCCTGGT CGCGGTCCAG GGGCCGCGCG CCGCCGAGAT CCTGCTGTCG
CTCACCGCCG CCGAGCACCA GGACGCCGTG TCGTCGCTCA AGTACTACGC GATCACCCCG
GCGACGGTGG CCGGTACCGA CCTGCTGGTC GCGCGGACCG GCTACACCGG GGAGGACGGC
TTCGAGCTCT TCGTCGAGAA CGGTGCCGCC GTCGCGCTCT GGCGCGCGCT GCTCGTCGCC
GGCGAGCCGC TCGGGCTCGT CCCGGCCGGC CTCTCCGCCC GCGACAGCCT GCGGCTCGAG
GCCGGCATGC CGCTCTACGG GCACGAGCTC GACCTCACGA CCACGCCCTT CGAGGCAGGT
CTGGGACGTG TCGTCCGGCT CGACAAGACC GACGCCGACG GCGCTCCGGT CGACTTCGTG
GGACGTGCGG CCCTCGAGGC GCGCAAGTCC TCGGAGCCCG CACGCGTCCT CGTCGGGCTC
AAGGCGCTCG GCCGTCGGCC GGCCCGCGCC GGGTACCCGG TGGTGGTCGA CGCCTCGAAG
CTGGACCTCG TCATCGGCAC CGTGACCTCC GGTGCCCCGT CGCCGACGCT CGGCTACCCC
GTCGCGCTCG CCTACGTCAC GCCCGAGTAC TCTGCTGCCG GCACCCGCCT GGCGGTCGAC
GTCCGTGGCC GCGGTGAGGC CGTCGAGGTC GTCGAGACGC CGTTCTACCG CCGCCCGCGC
GGCTGA
 
Protein sequence
MSTARSTPLH DEHLALGASM TEFGGWMMPL RYGSDIAEHT AVRSAAGLFD LSHMGEIEVS 
GPGAGAALDH ALVGWLSTLE VGRARYSMIA QEDGAVVDDL VVYRTADETF LVVANAGNAE
VVLAALEERV VGFDAQVTFT SPEVALVAVQ GPRAAEILLS LTAAEHQDAV SSLKYYAITP
ATVAGTDLLV ARTGYTGEDG FELFVENGAA VALWRALLVA GEPLGLVPAG LSARDSLRLE
AGMPLYGHEL DLTTTPFEAG LGRVVRLDKT DADGAPVDFV GRAALEARKS SEPARVLVGL
KALGRRPARA GYPVVVDASK LDLVIGTVTS GAPSPTLGYP VALAYVTPEY SAAGTRLAVD
VRGRGEAVEV VETPFYRRPR G