| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_00420 |
|---|
| Symbol | |
|---|
| ID | 8631681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 42313 |
|---|
| End bp | 43866 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | DNA-3-methyladenine glycosylase II /DNA-O6-methylguanine--protein-cysteine S-methyltransferase /Transcriptional regulator Ada |
|---|
| Protein accession | YP_003312852 |
|---|
| Protein GI | 269793397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0163249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGCG ACCCGCTGTT CGCCGAGCGC TACGCGGCGA TCGACGCCCG CGACACCCGG
TTCGACGGGC AGTTCGTCAC GGCCGTGTCG AGCACCGGCA TCTACTGCCG CCCGTCCTGC
CCGGCGCGCA CCCCGAAGCC GGCCCACACG GCCTTCTACC GGACGTCGGC CGCCGCGCAC
GAGGCCGGCT TCCGCGCCTG CCGACGCTGC CTCCCGGAGG CCACGCCCGG CACCCCCGAG
TGGGACCTGC GACGCGACCT GACCGGTCGG GCGATGCGGC TCATCGCGGA CGGGGTGGTC
GACCGTGAGG GGGTGGACGG GCTGGCGGCC CGGCTCGGCT ACACGTCACG GCACGTGCAC
CGCCTGCTGG TCGCCGAGCT GGGCGCCGGA CCGACGGCGC TCGCCCGGGC GCAGCGCGCG
CAGACGGCCC GCTCGCTGCT CGTCGGGACC GACCTCACGC TCGCCGAGGT GGCGTTCGCC
TCAGGCTTCG GGTCGGTCCG CCAGTTCAAC GAGACCGTCC GGCGGGTCTT CGCCGCGCGG
CCCTCGGAGC TGCGCGCCCG TGCCCGCCGA CCCGCGGCCC ACGACGGGCT GGAGGTGGAC
GGGGCGCAGG TCCGGCTGGT CGTCGACCTC CCGGTCCGTC AGCCCTTCGA CGCGGCCGGC
GTGCTCGGCT TCCTCGCCGA CCGGGCCGTC GCAGGCGTCG AGACGGCGAC CACGGAGGAC
GACGGGACGA TGCGCTACGC ACGGACCCTC GACCTCCCGC ACGGCCCGGG AGCCGTCGAG
GTGGTCGCCG TCCGGCGTCA GGGGCGGTGG GAGATGCGGG CGCGCCTGGA GCTCGCCGCC
CTCGGCGACG TCGCGCCGGC CGTCGCCCGT GTGCGACGCC TGCTCGACCT CGACGCCGAC
CCGGTGGCCG TCGACTCGGC GCTCGCGCAG GACCCGGCGC TGCGACCTCT CGTCGAAGAG
CGTCCGGGGA CCCGTGTGCC CGGAGCCGTC GACCCGCACG AGCTCGTGGT GCGCGCCGTG
GTGGGGCAGC AGATCTCCGT CGCCGCCGCC CGCACCCACC TGGGCCGGCT CACCGCGCGG
CTCGGCACGC CTTACCGCTC GGCGTTCGCG GGGCTCGACC GGCTGTTCCC GACGGCCGCA
CAGGTCGCAG CCGGGGTCCC GGTGCCGGCG GACGACGAGG TGCTCGACCC CGACAGGCCG
CTGCGGCTGC CGCGGCGGTC GGTCCGGGCG GTCGTCTCCG TCGCACGTGC GCTCGCGGAC
GGGGACCTCG TGGTCGACGT CGGAGCCGAT GCGGCGGCGC TGCGGGCCGA GCTGGTCGAC
CGCCCGGGCA TCGGGCCGTG GACCGCGGCC TACGTGGCGA TGCGGGTGCT GGGTGACCCG
GACGCCTGGT TGCCCGGTGA CGTGGCGCTC GTGGCCGGGG CGCGGGCCGT CGGTCTGCTC
GGCACCGAGA AGACGACCTC TGCGGCGCAC CGTGCGCTGG CAGAGGGTGC GTCGGTGTGG
GCCCCGTGGC GGTCCTACGC CGTCGTGCAC CTGTGGCGCG CGGCGTCAGT CTGA
|
|---|
| Protein sequence | MPGDPLFAER YAAIDARDTR FDGQFVTAVS STGIYCRPSC PARTPKPAHT AFYRTSAAAH
EAGFRACRRC LPEATPGTPE WDLRRDLTGR AMRLIADGVV DREGVDGLAA RLGYTSRHVH
RLLVAELGAG PTALARAQRA QTARSLLVGT DLTLAEVAFA SGFGSVRQFN ETVRRVFAAR
PSELRARARR PAAHDGLEVD GAQVRLVVDL PVRQPFDAAG VLGFLADRAV AGVETATTED
DGTMRYARTL DLPHGPGAVE VVAVRRQGRW EMRARLELAA LGDVAPAVAR VRRLLDLDAD
PVAVDSALAQ DPALRPLVEE RPGTRVPGAV DPHELVVRAV VGQQISVAAA RTHLGRLTAR
LGTPYRSAFA GLDRLFPTAA QVAAGVPVPA DDEVLDPDRP LRLPRRSVRA VVSVARALAD
GDLVVDVGAD AAALRAELVD RPGIGPWTAA YVAMRVLGDP DAWLPGDVAL VAGARAVGLL
GTEKTTSAAH RALAEGASVW APWRSYAVVH LWRAASV
|
|---|
| |